Protein–RNA interactions for Protein: O60896

RAMP3, Receptor activity-modifying protein 3, humanhuman

Predictions only

Length 148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAMP3O60896 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAMP3O60896 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAMP3O60896 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAMP3O60896 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RAMP3O60896 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RAMP3O60896 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAMP3O60896 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAMP3O60896 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.77■■□□□ 1.08
RAMP3O60896 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
RAMP3O60896 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAMP3O60896 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAMP3O60896 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RAMP3O60896 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAMP3O60896 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RAMP3O60896 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAMP3O60896 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RAMP3O60896 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAMP3O60896 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAMP3O60896 RARRES2P7-201ENST00000567349 469 ntBASIC21.72■■□□□ 1.07
RAMP3O60896 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAMP3O60896 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RAMP3O60896 AL135925.1-201ENST00000605920 1701 ntBASIC21.7■■□□□ 1.06
RAMP3O60896 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.7■■□□□ 1.06
RAMP3O60896 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAMP3O60896 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAMP3O60896 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAMP3O60896 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RAMP3O60896 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.68■■□□□ 1.06
RAMP3O60896 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.68■■□□□ 1.06
RAMP3O60896 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.68■■□□□ 1.06
RAMP3O60896 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAMP3O60896 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAMP3O60896 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RAMP3O60896 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAMP3O60896 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RAMP3O60896 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.65■■□□□ 1.06
RAMP3O60896 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.64■■□□□ 1.05
RAMP3O60896 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RAMP3O60896 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAMP3O60896 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAMP3O60896 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAMP3O60896 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAMP3O60896 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAMP3O60896 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.61■■□□□ 1.05
RAMP3O60896 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.6■■□□□ 1.05
RAMP3O60896 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAMP3O60896 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.6■■□□□ 1.05
RAMP3O60896 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAMP3O60896 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RAMP3O60896 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.58■■□□□ 1.05
RAMP3O60896 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.57■■□□□ 1.04
RAMP3O60896 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.57■■□□□ 1.04
RAMP3O60896 WASH5P-204ENST00000632292 975 ntBASIC21.57■■□□□ 1.04
RAMP3O60896 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAMP3O60896 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAMP3O60896 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAMP3O60896 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAMP3O60896 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.56■■□□□ 1.04
RAMP3O60896 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAMP3O60896 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.56■■□□□ 1.04
RAMP3O60896 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAMP3O60896 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RAMP3O60896 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAMP3O60896 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
RAMP3O60896 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAMP3O60896 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAMP3O60896 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAMP3O60896 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RAMP3O60896 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAMP3O60896 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
RAMP3O60896 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.53■■□□□ 1.04
RAMP3O60896 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAMP3O60896 AL133380.1-201ENST00000506013 324 ntBASIC21.52■■□□□ 1.04
RAMP3O60896 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.52■■□□□ 1.04
RAMP3O60896 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAMP3O60896 AC097358.2-201ENST00000607541 1159 ntBASIC21.51■■□□□ 1.03
RAMP3O60896 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RAMP3O60896 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAMP3O60896 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAMP3O60896 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAMP3O60896 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RAMP3O60896 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAMP3O60896 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RAMP3O60896 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAMP3O60896 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.49■■□□□ 1.03
RAMP3O60896 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAMP3O60896 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAMP3O60896 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RAMP3O60896 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAMP3O60896 SETD8P1-201ENST00000623146 1180 ntBASIC21.48■■□□□ 1.03
RAMP3O60896 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAMP3O60896 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAMP3O60896 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAMP3O60896 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.45■■□□□ 1.02
RAMP3O60896 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RAMP3O60896 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.45■■□□□ 1.02
RAMP3O60896 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAMP3O60896 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAMP3O60896 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAMP3O60896 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms