Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
ATP2A1O14983 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.92■■■□□ 2.54
ATP2A1O14983 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.92■■■□□ 2.54
ATP2A1O14983 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
ATP2A1O14983 AC120057.4-201ENST00000624722 1615 ntBASIC30.91■■■□□ 2.54
ATP2A1O14983 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.91■■■□□ 2.54
ATP2A1O14983 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
ATP2A1O14983 DUX4L29-201ENST00000425409 679 ntBASIC30.89■■■□□ 2.54
ATP2A1O14983 AC108673.1-201ENST00000510422 1159 ntBASIC30.87■■■□□ 2.53
ATP2A1O14983 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
ATP2A1O14983 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
ATP2A1O14983 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
ATP2A1O14983 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.85■■■□□ 2.53
ATP2A1O14983 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
ATP2A1O14983 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
ATP2A1O14983 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
ATP2A1O14983 MIR6090-201ENST00000622481 60 ntBASIC30.83■■■□□ 2.53
ATP2A1O14983 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
ATP2A1O14983 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
ATP2A1O14983 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
ATP2A1O14983 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
ATP2A1O14983 AC021231.2-201ENST00000594613 730 ntBASIC30.81■■■□□ 2.52
ATP2A1O14983 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.81■■■□□ 2.52
ATP2A1O14983 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.8■■■□□ 2.52
ATP2A1O14983 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
ATP2A1O14983 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.8■■■□□ 2.52
ATP2A1O14983 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
ATP2A1O14983 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
ATP2A1O14983 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
ATP2A1O14983 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
ATP2A1O14983 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
ATP2A1O14983 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
ATP2A1O14983 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
ATP2A1O14983 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
ATP2A1O14983 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.76■■■□□ 2.52
ATP2A1O14983 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
ATP2A1O14983 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
ATP2A1O14983 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
ATP2A1O14983 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.75■■■□□ 2.51
ATP2A1O14983 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
ATP2A1O14983 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
ATP2A1O14983 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.74■■■□□ 2.51
ATP2A1O14983 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.74■■■□□ 2.51
ATP2A1O14983 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
ATP2A1O14983 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.73■■■□□ 2.51
ATP2A1O14983 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
ATP2A1O14983 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
ATP2A1O14983 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
ATP2A1O14983 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.73■■■□□ 2.51
ATP2A1O14983 HLA-V-202ENST00000446817 847 ntBASIC30.72■■■□□ 2.51
ATP2A1O14983 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
ATP2A1O14983 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.69■■■□□ 2.5
ATP2A1O14983 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ATP2A1O14983 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
ATP2A1O14983 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.67■■■□□ 2.5
ATP2A1O14983 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ATP2A1O14983 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
ATP2A1O14983 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ATP2A1O14983 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.65■■■□□ 2.5
ATP2A1O14983 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.65■■■□□ 2.5
ATP2A1O14983 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.64■■■□□ 2.5
ATP2A1O14983 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.63■■■□□ 2.49
ATP2A1O14983 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.63■■■□□ 2.49
ATP2A1O14983 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ATP2A1O14983 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ATP2A1O14983 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.61■■■□□ 2.49
ATP2A1O14983 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
ATP2A1O14983 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ATP2A1O14983 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ATP2A1O14983 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
ATP2A1O14983 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
ATP2A1O14983 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
ATP2A1O14983 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.56■■■□□ 2.48
ATP2A1O14983 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.56■■■□□ 2.48
ATP2A1O14983 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
ATP2A1O14983 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
ATP2A1O14983 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ATP2A1O14983 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ATP2A1O14983 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
ATP2A1O14983 LINC01971-201ENST00000617888 1048 ntBASIC30.53■■■□□ 2.48
ATP2A1O14983 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ATP2A1O14983 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
ATP2A1O14983 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
ATP2A1O14983 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.48
ATP2A1O14983 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
ATP2A1O14983 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
ATP2A1O14983 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
ATP2A1O14983 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.5■■■□□ 2.47
ATP2A1O14983 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
ATP2A1O14983 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
ATP2A1O14983 MIR639-201ENST00000384974 98 ntBASIC30.48■■■□□ 2.47
ATP2A1O14983 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.48■■■□□ 2.47
ATP2A1O14983 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
ATP2A1O14983 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
ATP2A1O14983 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
ATP2A1O14983 MIR3648-2-201ENST00000581792 180 ntBASIC30.47■■■□□ 2.47
ATP2A1O14983 DUX4L11-201ENST00000611504 1267 ntBASIC30.47■■■□□ 2.47
ATP2A1O14983 DUX4L12-201ENST00000614593 1267 ntBASIC30.47■■■□□ 2.47
ATP2A1O14983 MIR3648-1-201ENST00000615959 180 ntBASIC30.47■■■□□ 2.47
ATP2A1O14983 DUX4L14-201ENST00000621227 1267 ntBASIC30.47■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms