Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
RTCBQ9Y3I0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC26.75■■□□□ 1.87
RTCBQ9Y3I0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RTCBQ9Y3I0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC26.75■■□□□ 1.87
RTCBQ9Y3I0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
RTCBQ9Y3I0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC26.75■■□□□ 1.87
RTCBQ9Y3I0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RTCBQ9Y3I0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC26.75■■□□□ 1.87
RTCBQ9Y3I0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC26.75■■□□□ 1.87
RTCBQ9Y3I0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RTCBQ9Y3I0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
RTCBQ9Y3I0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RTCBQ9Y3I0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
RTCBQ9Y3I0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC26.74■■□□□ 1.87
RTCBQ9Y3I0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC26.74■■□□□ 1.87
RTCBQ9Y3I0 C1QBPP2-201ENST00000528754 825 ntBASIC26.74■■□□□ 1.87
RTCBQ9Y3I0 MIR4497-201ENST00000583208 89 ntBASIC26.74■■□□□ 1.87
RTCBQ9Y3I0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTCBQ9Y3I0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTCBQ9Y3I0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTCBQ9Y3I0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC26.73■■□□□ 1.87
RTCBQ9Y3I0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
RTCBQ9Y3I0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC26.73■■□□□ 1.87
RTCBQ9Y3I0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC26.73■■□□□ 1.87
RTCBQ9Y3I0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RTCBQ9Y3I0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC26.73■■□□□ 1.87
RTCBQ9Y3I0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTCBQ9Y3I0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
RTCBQ9Y3I0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTCBQ9Y3I0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTCBQ9Y3I0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTCBQ9Y3I0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.72■■□□□ 1.87
RTCBQ9Y3I0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTCBQ9Y3I0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTCBQ9Y3I0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTCBQ9Y3I0 CDV3P1-201ENST00000471403 739 ntBASIC26.72■■□□□ 1.87
RTCBQ9Y3I0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC26.72■■□□□ 1.87
RTCBQ9Y3I0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RTCBQ9Y3I0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RTCBQ9Y3I0 PNMA6B-201ENST00000538162 1200 ntBASIC26.72■■□□□ 1.87
RTCBQ9Y3I0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC26.72■■□□□ 1.87
RTCBQ9Y3I0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC26.72■■□□□ 1.87
RTCBQ9Y3I0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTCBQ9Y3I0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RTCBQ9Y3I0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RTCBQ9Y3I0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTCBQ9Y3I0 AC139530.1-201ENST00000575312 1977 ntBASIC26.71■■□□□ 1.87
RTCBQ9Y3I0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RTCBQ9Y3I0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTCBQ9Y3I0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTCBQ9Y3I0 KRT17P3-201ENST00000420566 1262 ntBASIC26.71■■□□□ 1.87
RTCBQ9Y3I0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC26.71■■□□□ 1.87
RTCBQ9Y3I0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC26.71■■□□□ 1.87
RTCBQ9Y3I0 AL589743.5-201ENST00000616611 1050 ntBASIC26.71■■□□□ 1.87
RTCBQ9Y3I0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC26.71■■□□□ 1.87
RTCBQ9Y3I0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC26.71■■□□□ 1.87
RTCBQ9Y3I0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC26.7■■□□□ 1.87
RTCBQ9Y3I0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.7■■□□□ 1.87
RTCBQ9Y3I0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
RTCBQ9Y3I0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RTCBQ9Y3I0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC26.7■■□□□ 1.86
RTCBQ9Y3I0 AC003102.1-202ENST00000563394 1796 ntBASIC26.7■■□□□ 1.86
RTCBQ9Y3I0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
RTCBQ9Y3I0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
RTCBQ9Y3I0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RTCBQ9Y3I0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RTCBQ9Y3I0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RTCBQ9Y3I0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
RTCBQ9Y3I0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC26.69■■□□□ 1.86
RTCBQ9Y3I0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
RTCBQ9Y3I0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RTCBQ9Y3I0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RTCBQ9Y3I0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC26.69■■□□□ 1.86
RTCBQ9Y3I0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
RTCBQ9Y3I0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RTCBQ9Y3I0 RN7SL471P-201ENST00000580476 299 ntBASIC26.69■■□□□ 1.86
RTCBQ9Y3I0 AC073912.3-201ENST00000624414 853 ntBASIC26.69■■□□□ 1.86
RTCBQ9Y3I0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RTCBQ9Y3I0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
RTCBQ9Y3I0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RTCBQ9Y3I0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
RTCBQ9Y3I0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RTCBQ9Y3I0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
RTCBQ9Y3I0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RTCBQ9Y3I0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
RTCBQ9Y3I0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
RTCBQ9Y3I0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
RTCBQ9Y3I0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC26.68■■□□□ 1.86
RTCBQ9Y3I0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC26.68■■□□□ 1.86
RTCBQ9Y3I0 Z99916.2-201ENST00000604037 246 ntBASIC26.68■■□□□ 1.86
RTCBQ9Y3I0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC26.68■■□□□ 1.86
RTCBQ9Y3I0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RTCBQ9Y3I0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
RTCBQ9Y3I0 AC092368.3-202ENST00000574180 1591 ntBASIC26.67■■□□□ 1.86
RTCBQ9Y3I0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.67■■□□□ 1.86
RTCBQ9Y3I0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RTCBQ9Y3I0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RTCBQ9Y3I0 MCRIP2P1-201ENST00000394346 511 ntBASIC26.67■■□□□ 1.86
RTCBQ9Y3I0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
RTCBQ9Y3I0 ECEL1P3-201ENST00000427961 737 ntBASIC26.67■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms