Protein–RNA interactions for Protein: Q9UHF7

TRPS1, Zinc finger transcription factor Trps1, humanhuman

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1Q9UHF7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRPS1Q9UHF7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.3■□□□□ 0.84
TRPS1Q9UHF7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.3■□□□□ 0.84
TRPS1Q9UHF7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.3■□□□□ 0.84
TRPS1Q9UHF7 AL139246.5-201ENST00000606645 996 ntBASIC20.3■□□□□ 0.84
TRPS1Q9UHF7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TRPS1Q9UHF7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.3■□□□□ 0.84
TRPS1Q9UHF7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRPS1Q9UHF7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRPS1Q9UHF7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRPS1Q9UHF7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRPS1Q9UHF7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TRPS1Q9UHF7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.29■□□□□ 0.84
TRPS1Q9UHF7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRPS1Q9UHF7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRPS1Q9UHF7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRPS1Q9UHF7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRPS1Q9UHF7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TRPS1Q9UHF7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRPS1Q9UHF7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.29■□□□□ 0.84
TRPS1Q9UHF7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.29■□□□□ 0.84
TRPS1Q9UHF7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.29■□□□□ 0.84
TRPS1Q9UHF7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRPS1Q9UHF7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRPS1Q9UHF7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRPS1Q9UHF7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.29■□□□□ 0.84
TRPS1Q9UHF7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 MIR638-201ENST00000385237 100 ntBASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 AL354811.1-201ENST00000610286 706 ntBASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.28■□□□□ 0.84
TRPS1Q9UHF7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.27■□□□□ 0.84
TRPS1Q9UHF7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.27■□□□□ 0.84
TRPS1Q9UHF7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRPS1Q9UHF7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
TRPS1Q9UHF7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.27■□□□□ 0.84
TRPS1Q9UHF7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TRPS1Q9UHF7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRPS1Q9UHF7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRPS1Q9UHF7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRPS1Q9UHF7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.27■□□□□ 0.84
TRPS1Q9UHF7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TRPS1Q9UHF7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRPS1Q9UHF7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRPS1Q9UHF7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
TRPS1Q9UHF7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRPS1Q9UHF7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.27■□□□□ 0.83
TRPS1Q9UHF7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.27■□□□□ 0.83
TRPS1Q9UHF7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRPS1Q9UHF7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRPS1Q9UHF7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRPS1Q9UHF7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRPS1Q9UHF7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRPS1Q9UHF7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRPS1Q9UHF7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRPS1Q9UHF7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.26■□□□□ 0.83
TRPS1Q9UHF7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRPS1Q9UHF7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRPS1Q9UHF7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRPS1Q9UHF7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRPS1Q9UHF7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.25■□□□□ 0.83
TRPS1Q9UHF7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRPS1Q9UHF7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.25■□□□□ 0.83
TRPS1Q9UHF7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRPS1Q9UHF7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRPS1Q9UHF7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRPS1Q9UHF7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRPS1Q9UHF7 TPRG1LP1-201ENST00000598702 760 ntBASIC20.25■□□□□ 0.83
TRPS1Q9UHF7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.25■□□□□ 0.83
TRPS1Q9UHF7 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.25■□□□□ 0.83
TRPS1Q9UHF7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.25■□□□□ 0.83
TRPS1Q9UHF7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.25■□□□□ 0.83
TRPS1Q9UHF7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
TRPS1Q9UHF7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TRPS1Q9UHF7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.25■□□□□ 0.83
TRPS1Q9UHF7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.25■□□□□ 0.83
TRPS1Q9UHF7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRPS1Q9UHF7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TRPS1Q9UHF7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TRPS1Q9UHF7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRPS1Q9UHF7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRPS1Q9UHF7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRPS1Q9UHF7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.24■□□□□ 0.83
TRPS1Q9UHF7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms