Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
EBF1Q9UH73 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.42■■□□□ 1.02
EBF1Q9UH73 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.42■■□□□ 1.02
EBF1Q9UH73 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.42■■□□□ 1.02
EBF1Q9UH73 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
EBF1Q9UH73 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.42■■□□□ 1.02
EBF1Q9UH73 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.42■■□□□ 1.02
EBF1Q9UH73 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
EBF1Q9UH73 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
EBF1Q9UH73 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.41■■□□□ 1.02
EBF1Q9UH73 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
EBF1Q9UH73 AP006587.3-201ENST00000525742 1516 ntBASIC21.41■■□□□ 1.02
EBF1Q9UH73 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
EBF1Q9UH73 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
EBF1Q9UH73 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
EBF1Q9UH73 PRORSD1P-201ENST00000295112 541 ntBASIC21.41■■□□□ 1.02
EBF1Q9UH73 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.41■■□□□ 1.02
EBF1Q9UH73 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.41■■□□□ 1.02
EBF1Q9UH73 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.41■■□□□ 1.02
EBF1Q9UH73 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
EBF1Q9UH73 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.41■■□□□ 1.02
EBF1Q9UH73 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.41■■□□□ 1.02
EBF1Q9UH73 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.41■■□□□ 1.02
EBF1Q9UH73 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
EBF1Q9UH73 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.41■■□□□ 1.02
EBF1Q9UH73 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.41■■□□□ 1.02
EBF1Q9UH73 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.41■■□□□ 1.02
EBF1Q9UH73 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
EBF1Q9UH73 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.41■■□□□ 1.02
EBF1Q9UH73 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
EBF1Q9UH73 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
EBF1Q9UH73 C1orf229-201ENST00000623686 2258 ntBASIC21.4■■□□□ 1.02
EBF1Q9UH73 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
EBF1Q9UH73 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
EBF1Q9UH73 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
EBF1Q9UH73 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
EBF1Q9UH73 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
EBF1Q9UH73 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
EBF1Q9UH73 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
EBF1Q9UH73 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
EBF1Q9UH73 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.4■■□□□ 1.02
EBF1Q9UH73 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.4■■□□□ 1.02
EBF1Q9UH73 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
EBF1Q9UH73 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
EBF1Q9UH73 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
EBF1Q9UH73 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
EBF1Q9UH73 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
EBF1Q9UH73 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
EBF1Q9UH73 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
EBF1Q9UH73 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.39■■□□□ 1.02
EBF1Q9UH73 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
EBF1Q9UH73 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
EBF1Q9UH73 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
EBF1Q9UH73 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.39■■□□□ 1.01
EBF1Q9UH73 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
EBF1Q9UH73 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
EBF1Q9UH73 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.39■■□□□ 1.01
EBF1Q9UH73 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
EBF1Q9UH73 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.39■■□□□ 1.01
EBF1Q9UH73 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
EBF1Q9UH73 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
EBF1Q9UH73 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EBF1Q9UH73 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.38■■□□□ 1.01
EBF1Q9UH73 AC093787.1-201ENST00000450396 207 ntBASIC21.38■■□□□ 1.01
EBF1Q9UH73 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.38■■□□□ 1.01
EBF1Q9UH73 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.38■■□□□ 1.01
EBF1Q9UH73 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.38■■□□□ 1.01
EBF1Q9UH73 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.38■■□□□ 1.01
EBF1Q9UH73 AC120498.10-201ENST00000621827 505 ntBASIC21.38■■□□□ 1.01
EBF1Q9UH73 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
EBF1Q9UH73 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
EBF1Q9UH73 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
EBF1Q9UH73 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.37■■□□□ 1.01
EBF1Q9UH73 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.37■■□□□ 1.01
EBF1Q9UH73 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
EBF1Q9UH73 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.37■■□□□ 1.01
EBF1Q9UH73 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EBF1Q9UH73 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EBF1Q9UH73 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.37■■□□□ 1.01
EBF1Q9UH73 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
EBF1Q9UH73 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
EBF1Q9UH73 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.37■■□□□ 1.01
EBF1Q9UH73 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.37■■□□□ 1.01
EBF1Q9UH73 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EBF1Q9UH73 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EBF1Q9UH73 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
EBF1Q9UH73 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.37■■□□□ 1.01
EBF1Q9UH73 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EBF1Q9UH73 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EBF1Q9UH73 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EBF1Q9UH73 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
EBF1Q9UH73 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EBF1Q9UH73 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
EBF1Q9UH73 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EBF1Q9UH73 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EBF1Q9UH73 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EBF1Q9UH73 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.36■■□□□ 1.01
EBF1Q9UH73 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.36■■□□□ 1.01
EBF1Q9UH73 AL162412.1-201ENST00000567129 965 ntBASIC21.36■■□□□ 1.01
EBF1Q9UH73 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms