Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DUX4Q9UBX2 AP001330.3-201ENST00000520123 633 ntBASIC18.35■□□□□ 0.53
DUX4Q9UBX2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.35■□□□□ 0.53
DUX4Q9UBX2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DUX4Q9UBX2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.35■□□□□ 0.53
DUX4Q9UBX2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DUX4Q9UBX2 BCL2-203ENST00000589955 5011 ntBASIC18.35■□□□□ 0.53
DUX4Q9UBX2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DUX4Q9UBX2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX4Q9UBX2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DUX4Q9UBX2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
DUX4Q9UBX2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX4Q9UBX2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX4Q9UBX2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DUX4Q9UBX2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.34■□□□□ 0.53
DUX4Q9UBX2 OR2I1P-207ENST00000453522 948 ntBASIC18.34■□□□□ 0.53
DUX4Q9UBX2 AF213884.3-201ENST00000563833 479 ntBASIC18.34■□□□□ 0.53
DUX4Q9UBX2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX4Q9UBX2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX4Q9UBX2 AC026310.3-201ENST00000625186 2373 ntBASIC18.34■□□□□ 0.53
DUX4Q9UBX2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX4Q9UBX2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
DUX4Q9UBX2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX4Q9UBX2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX4Q9UBX2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DUX4Q9UBX2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.33■□□□□ 0.53
DUX4Q9UBX2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DUX4Q9UBX2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DUX4Q9UBX2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.33■□□□□ 0.53
DUX4Q9UBX2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
DUX4Q9UBX2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
DUX4Q9UBX2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
DUX4Q9UBX2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DUX4Q9UBX2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DUX4Q9UBX2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DUX4Q9UBX2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.33■□□□□ 0.52
DUX4Q9UBX2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.33■□□□□ 0.52
DUX4Q9UBX2 AC008764.7-201ENST00000593779 1081 ntBASIC18.33■□□□□ 0.52
DUX4Q9UBX2 AC005837.3-201ENST00000612163 286 ntBASIC18.33■□□□□ 0.52
DUX4Q9UBX2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.33■□□□□ 0.52
DUX4Q9UBX2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
DUX4Q9UBX2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DUX4Q9UBX2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 LINC01521-201ENST00000504184 1943 ntBASIC18.32■□□□□ 0.52
DUX4Q9UBX2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 EDA-201ENST00000338901 1233 ntBASIC18.32■□□□□ 0.52
DUX4Q9UBX2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 AC007952.6-201ENST00000573168 2673 ntBASIC18.32■□□□□ 0.52
DUX4Q9UBX2 AC003957.1-201ENST00000625108 2673 ntBASIC18.32■□□□□ 0.52
DUX4Q9UBX2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
DUX4Q9UBX2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DUX4Q9UBX2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DUX4Q9UBX2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DUX4Q9UBX2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.31■□□□□ 0.52
DUX4Q9UBX2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DUX4Q9UBX2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.31■□□□□ 0.52
DUX4Q9UBX2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
DUX4Q9UBX2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DUX4Q9UBX2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DUX4Q9UBX2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DUX4Q9UBX2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DUX4Q9UBX2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DUX4Q9UBX2 AL355001.2-201ENST00000620617 1191 ntBASIC18.31■□□□□ 0.52
DUX4Q9UBX2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DUX4Q9UBX2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DUX4Q9UBX2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DUX4Q9UBX2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.31■□□□□ 0.52
DUX4Q9UBX2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.31■□□□□ 0.52
DUX4Q9UBX2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DUX4Q9UBX2 LINC01960-201ENST00000563759 1884 ntBASIC18.31■□□□□ 0.52
DUX4Q9UBX2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
DUX4Q9UBX2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
DUX4Q9UBX2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DUX4Q9UBX2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.3■□□□□ 0.52
DUX4Q9UBX2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
DUX4Q9UBX2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
DUX4Q9UBX2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DUX4Q9UBX2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
DUX4Q9UBX2 MIR939-201ENST00000401314 82 ntBASIC18.3■□□□□ 0.52
DUX4Q9UBX2 AC099791.1-201ENST00000416440 715 ntBASIC18.3■□□□□ 0.52
DUX4Q9UBX2 BX842568.3-201ENST00000418104 571 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms