Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HACD3Q9P035 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HACD3Q9P035 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HACD3Q9P035 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.22■□□□□ 0.99
HACD3Q9P035 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.22■□□□□ 0.99
HACD3Q9P035 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HACD3Q9P035 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HACD3Q9P035 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HACD3Q9P035 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HACD3Q9P035 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
HACD3Q9P035 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HACD3Q9P035 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HACD3Q9P035 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HACD3Q9P035 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HACD3Q9P035 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HACD3Q9P035 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HACD3Q9P035 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
HACD3Q9P035 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.21■□□□□ 0.99
HACD3Q9P035 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.21■□□□□ 0.99
HACD3Q9P035 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.21■□□□□ 0.99
HACD3Q9P035 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HACD3Q9P035 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.21■□□□□ 0.99
HACD3Q9P035 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HACD3Q9P035 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HACD3Q9P035 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
HACD3Q9P035 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HACD3Q9P035 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HACD3Q9P035 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HACD3Q9P035 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.2■□□□□ 0.98
HACD3Q9P035 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HACD3Q9P035 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HACD3Q9P035 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HACD3Q9P035 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HACD3Q9P035 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HACD3Q9P035 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.2■□□□□ 0.98
HACD3Q9P035 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.2■□□□□ 0.98
HACD3Q9P035 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HACD3Q9P035 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HACD3Q9P035 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.2■□□□□ 0.98
HACD3Q9P035 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HACD3Q9P035 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.2■□□□□ 0.98
HACD3Q9P035 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HACD3Q9P035 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
HACD3Q9P035 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HACD3Q9P035 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
HACD3Q9P035 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HACD3Q9P035 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HACD3Q9P035 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.19■□□□□ 0.98
HACD3Q9P035 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
HACD3Q9P035 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.19■□□□□ 0.98
HACD3Q9P035 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.19■□□□□ 0.98
HACD3Q9P035 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.19■□□□□ 0.98
HACD3Q9P035 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HACD3Q9P035 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
HACD3Q9P035 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HACD3Q9P035 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HACD3Q9P035 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.18■□□□□ 0.98
HACD3Q9P035 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HACD3Q9P035 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
HACD3Q9P035 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
HACD3Q9P035 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.18■□□□□ 0.98
HACD3Q9P035 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HACD3Q9P035 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HACD3Q9P035 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HACD3Q9P035 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HACD3Q9P035 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HACD3Q9P035 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HACD3Q9P035 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HACD3Q9P035 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HACD3Q9P035 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HACD3Q9P035 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HACD3Q9P035 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.18■□□□□ 0.98
HACD3Q9P035 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.18■□□□□ 0.98
HACD3Q9P035 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.18■□□□□ 0.98
HACD3Q9P035 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HACD3Q9P035 AC034268.1-201ENST00000441047 882 ntBASIC21.18■□□□□ 0.98
HACD3Q9P035 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HACD3Q9P035 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.18■□□□□ 0.98
HACD3Q9P035 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.18■□□□□ 0.98
HACD3Q9P035 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.18■□□□□ 0.98
HACD3Q9P035 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.18■□□□□ 0.98
HACD3Q9P035 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HACD3Q9P035 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HACD3Q9P035 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.17■□□□□ 0.98
HACD3Q9P035 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.17■□□□□ 0.98
HACD3Q9P035 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.17■□□□□ 0.98
HACD3Q9P035 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.17■□□□□ 0.98
HACD3Q9P035 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.17■□□□□ 0.98
HACD3Q9P035 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.17■□□□□ 0.98
HACD3Q9P035 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.17■□□□□ 0.98
HACD3Q9P035 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.17■□□□□ 0.98
HACD3Q9P035 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HACD3Q9P035 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.17■□□□□ 0.98
HACD3Q9P035 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HACD3Q9P035 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.17■□□□□ 0.98
HACD3Q9P035 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.17■□□□□ 0.98
HACD3Q9P035 AL137060.1-201ENST00000618151 2648 ntBASIC21.16■□□□□ 0.98
HACD3Q9P035 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HACD3Q9P035 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.16■□□□□ 0.98
HACD3Q9P035 Z98882.1-201ENST00000622160 2253 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms