Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
NCKIPSDQ9NZQ3 AC004854.2-201ENST00000608450 1441 ntBASIC21.21■□□□□ 0.99
NCKIPSDQ9NZQ3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCKIPSDQ9NZQ3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.21■□□□□ 0.99
NCKIPSDQ9NZQ3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
NCKIPSDQ9NZQ3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.21■□□□□ 0.99
NCKIPSDQ9NZQ3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.21■□□□□ 0.99
NCKIPSDQ9NZQ3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
NCKIPSDQ9NZQ3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCKIPSDQ9NZQ3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCKIPSDQ9NZQ3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
NCKIPSDQ9NZQ3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.21■□□□□ 0.99
NCKIPSDQ9NZQ3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.21■□□□□ 0.99
NCKIPSDQ9NZQ3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCKIPSDQ9NZQ3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NCKIPSDQ9NZQ3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCKIPSDQ9NZQ3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NCKIPSDQ9NZQ3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.2■□□□□ 0.98
NCKIPSDQ9NZQ3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.2■□□□□ 0.98
NCKIPSDQ9NZQ3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.2■□□□□ 0.98
NCKIPSDQ9NZQ3 AC079140.4-201ENST00000507448 529 ntBASIC21.2■□□□□ 0.98
NCKIPSDQ9NZQ3 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.2■□□□□ 0.98
NCKIPSDQ9NZQ3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.2■□□□□ 0.98
NCKIPSDQ9NZQ3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
NCKIPSDQ9NZQ3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NCKIPSDQ9NZQ3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NCKIPSDQ9NZQ3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCKIPSDQ9NZQ3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.2■□□□□ 0.98
NCKIPSDQ9NZQ3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCKIPSDQ9NZQ3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 AC079089.2-201ENST00000531211 1277 ntBASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 KRT18P61-201ENST00000585825 1298 ntBASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCKIPSDQ9NZQ3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 AC026185.1-201ENST00000445748 174 ntBASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 AC073111.5-205ENST00000641717 521 ntBASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NCKIPSDQ9NZQ3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.17■□□□□ 0.98
NCKIPSDQ9NZQ3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.17■□□□□ 0.98
NCKIPSDQ9NZQ3 HLA-L-209ENST00000420110 1011 ntBASIC21.17■□□□□ 0.98
NCKIPSDQ9NZQ3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.17■□□□□ 0.98
NCKIPSDQ9NZQ3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.17■□□□□ 0.98
NCKIPSDQ9NZQ3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.17■□□□□ 0.98
NCKIPSDQ9NZQ3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.17■□□□□ 0.98
NCKIPSDQ9NZQ3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.17■□□□□ 0.98
NCKIPSDQ9NZQ3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCKIPSDQ9NZQ3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.17■□□□□ 0.98
NCKIPSDQ9NZQ3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NCKIPSDQ9NZQ3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
NCKIPSDQ9NZQ3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.17■□□□□ 0.98
NCKIPSDQ9NZQ3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCKIPSDQ9NZQ3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCKIPSDQ9NZQ3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCKIPSDQ9NZQ3 SLC25A24-204ENST00000569674 2357 ntBASIC21.17■□□□□ 0.98
NCKIPSDQ9NZQ3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCKIPSDQ9NZQ3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NCKIPSDQ9NZQ3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCKIPSDQ9NZQ3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCKIPSDQ9NZQ3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NCKIPSDQ9NZQ3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NCKIPSDQ9NZQ3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NCKIPSDQ9NZQ3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms