Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SDHAF3Q9NRP4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SDHAF3Q9NRP4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SDHAF3Q9NRP4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
SDHAF3Q9NRP4 AC244015.2-201ENST00000616358 1861 ntBASIC19.27■□□□□ 0.68
SDHAF3Q9NRP4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SDHAF3Q9NRP4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SDHAF3Q9NRP4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SDHAF3Q9NRP4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SDHAF3Q9NRP4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.27■□□□□ 0.68
SDHAF3Q9NRP4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SDHAF3Q9NRP4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SDHAF3Q9NRP4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SDHAF3Q9NRP4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.27■□□□□ 0.67
SDHAF3Q9NRP4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SDHAF3Q9NRP4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SDHAF3Q9NRP4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SDHAF3Q9NRP4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.27■□□□□ 0.67
SDHAF3Q9NRP4 FBXW4P1-201ENST00000426721 2239 ntBASIC19.27■□□□□ 0.67
SDHAF3Q9NRP4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAF3Q9NRP4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SDHAF3Q9NRP4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SDHAF3Q9NRP4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SDHAF3Q9NRP4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SDHAF3Q9NRP4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SDHAF3Q9NRP4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SDHAF3Q9NRP4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SDHAF3Q9NRP4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.25■□□□□ 0.67
SDHAF3Q9NRP4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.25■□□□□ 0.67
SDHAF3Q9NRP4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SDHAF3Q9NRP4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.25■□□□□ 0.67
SDHAF3Q9NRP4 KRT18P11-201ENST00000435214 1283 ntBASIC19.25■□□□□ 0.67
SDHAF3Q9NRP4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.25■□□□□ 0.67
SDHAF3Q9NRP4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SDHAF3Q9NRP4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SDHAF3Q9NRP4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SDHAF3Q9NRP4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.25■□□□□ 0.67
SDHAF3Q9NRP4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SDHAF3Q9NRP4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SDHAF3Q9NRP4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SDHAF3Q9NRP4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 AC137761.2-201ENST00000561729 223 ntBASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 AC145350.3-201ENST00000569033 163 ntBASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 LINC00565-201ENST00000562710 2331 ntBASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAF3Q9NRP4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 AC016769.1-201ENST00000409132 1010 ntBASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms