Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 SLC47A1P1-202ENST00000449666 945 ntBASIC18.96■□□□□ 0.63
HINT3Q9NQE9 AP005435.1-201ENST00000529293 1178 ntBASIC18.96■□□□□ 0.63
HINT3Q9NQE9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 AL031432.3-201ENST00000607698 485 ntBASIC18.96■□□□□ 0.63
HINT3Q9NQE9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HINT3Q9NQE9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
HINT3Q9NQE9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HINT3Q9NQE9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HINT3Q9NQE9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HINT3Q9NQE9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HINT3Q9NQE9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HINT3Q9NQE9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HINT3Q9NQE9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HINT3Q9NQE9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HINT3Q9NQE9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HINT3Q9NQE9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HINT3Q9NQE9 SUDS3P1-201ENST00000505831 966 ntBASIC18.95■□□□□ 0.62
HINT3Q9NQE9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.95■□□□□ 0.62
HINT3Q9NQE9 AF213884.3-201ENST00000563833 479 ntBASIC18.95■□□□□ 0.62
HINT3Q9NQE9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
HINT3Q9NQE9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HINT3Q9NQE9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HINT3Q9NQE9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HINT3Q9NQE9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HINT3Q9NQE9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HINT3Q9NQE9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HINT3Q9NQE9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
HINT3Q9NQE9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
HINT3Q9NQE9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HINT3Q9NQE9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HINT3Q9NQE9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HINT3Q9NQE9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HINT3Q9NQE9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.94■□□□□ 0.62
HINT3Q9NQE9 AP001330.3-201ENST00000520123 633 ntBASIC18.94■□□□□ 0.62
HINT3Q9NQE9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.94■□□□□ 0.62
HINT3Q9NQE9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
HINT3Q9NQE9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HINT3Q9NQE9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HINT3Q9NQE9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HINT3Q9NQE9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HINT3Q9NQE9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HINT3Q9NQE9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HINT3Q9NQE9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HINT3Q9NQE9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HINT3Q9NQE9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.93■□□□□ 0.62
HINT3Q9NQE9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.93■□□□□ 0.62
HINT3Q9NQE9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HINT3Q9NQE9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
HINT3Q9NQE9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HINT3Q9NQE9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.93■□□□□ 0.62
HINT3Q9NQE9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
HINT3Q9NQE9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HINT3Q9NQE9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HINT3Q9NQE9 AL136967.2-201ENST00000623968 743 ntBASIC18.93■□□□□ 0.62
HINT3Q9NQE9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HINT3Q9NQE9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HINT3Q9NQE9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HINT3Q9NQE9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HINT3Q9NQE9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HINT3Q9NQE9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HINT3Q9NQE9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
HINT3Q9NQE9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HINT3Q9NQE9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HINT3Q9NQE9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HINT3Q9NQE9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HINT3Q9NQE9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.92■□□□□ 0.62
HINT3Q9NQE9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HINT3Q9NQE9 MIR939-201ENST00000401314 82 ntBASIC18.92■□□□□ 0.62
HINT3Q9NQE9 AC091305.1-201ENST00000479476 895 ntBASIC18.92■□□□□ 0.62
HINT3Q9NQE9 AC027682.1-201ENST00000562846 899 ntBASIC18.92■□□□□ 0.62
HINT3Q9NQE9 AC008764.7-201ENST00000593779 1081 ntBASIC18.92■□□□□ 0.62
HINT3Q9NQE9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HINT3Q9NQE9 AC092667.1-201ENST00000434301 2586 ntBASIC18.92■□□□□ 0.62
HINT3Q9NQE9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HINT3Q9NQE9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.92■□□□□ 0.62
HINT3Q9NQE9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HINT3Q9NQE9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HINT3Q9NQE9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HINT3Q9NQE9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HINT3Q9NQE9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HINT3Q9NQE9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HINT3Q9NQE9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
HINT3Q9NQE9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.91■□□□□ 0.62
HINT3Q9NQE9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HINT3Q9NQE9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.91■□□□□ 0.62
HINT3Q9NQE9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HINT3Q9NQE9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HINT3Q9NQE9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.91■□□□□ 0.62
HINT3Q9NQE9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HINT3Q9NQE9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HINT3Q9NQE9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HINT3Q9NQE9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms