Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF304Q9HCX3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF304Q9HCX3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ZNF304Q9HCX3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF304Q9HCX3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF304Q9HCX3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.95■□□□□ 0.78
ZNF304Q9HCX3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.95■□□□□ 0.78
ZNF304Q9HCX3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF304Q9HCX3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF304Q9HCX3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
ZNF304Q9HCX3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF304Q9HCX3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.95■□□□□ 0.78
ZNF304Q9HCX3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ZNF304Q9HCX3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.95■□□□□ 0.78
ZNF304Q9HCX3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF304Q9HCX3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.95■□□□□ 0.78
ZNF304Q9HCX3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF304Q9HCX3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.94■□□□□ 0.78
ZNF304Q9HCX3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF304Q9HCX3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF304Q9HCX3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF304Q9HCX3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF304Q9HCX3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.94■□□□□ 0.78
ZNF304Q9HCX3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF304Q9HCX3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.94■□□□□ 0.78
ZNF304Q9HCX3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF304Q9HCX3 DUX4L16-201ENST00000555130 1264 ntBASIC19.94■□□□□ 0.78
ZNF304Q9HCX3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.94■□□□□ 0.78
ZNF304Q9HCX3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.94■□□□□ 0.78
ZNF304Q9HCX3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.94■□□□□ 0.78
ZNF304Q9HCX3 AC231657.2-201ENST00000624556 255 ntBASIC19.94■□□□□ 0.78
ZNF304Q9HCX3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF304Q9HCX3 AL121603.2-201ENST00000557373 2117 ntBASIC19.94■□□□□ 0.78
ZNF304Q9HCX3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF304Q9HCX3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF304Q9HCX3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF304Q9HCX3 ECEL1P1-201ENST00000373592 1742 ntBASIC19.93■□□□□ 0.78
ZNF304Q9HCX3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF304Q9HCX3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF304Q9HCX3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF304Q9HCX3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF304Q9HCX3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF304Q9HCX3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF304Q9HCX3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.93■□□□□ 0.78
ZNF304Q9HCX3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.93■□□□□ 0.78
ZNF304Q9HCX3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
ZNF304Q9HCX3 AC010536.3-201ENST00000620306 533 ntBASIC19.93■□□□□ 0.78
ZNF304Q9HCX3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF304Q9HCX3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF304Q9HCX3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF304Q9HCX3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ZNF304Q9HCX3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF304Q9HCX3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNF304Q9HCX3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF304Q9HCX3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNF304Q9HCX3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.91■□□□□ 0.78
ZNF304Q9HCX3 AC007322.1-201ENST00000426983 750 ntBASIC19.91■□□□□ 0.78
ZNF304Q9HCX3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
ZNF304Q9HCX3 AC006970.2-201ENST00000450065 779 ntBASIC19.91■□□□□ 0.78
ZNF304Q9HCX3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNF304Q9HCX3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNF304Q9HCX3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.91■□□□□ 0.78
ZNF304Q9HCX3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF304Q9HCX3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ZNF304Q9HCX3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNF304Q9HCX3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF304Q9HCX3 AC012676.1-201ENST00000574705 1949 ntBASIC19.9■□□□□ 0.78
ZNF304Q9HCX3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.9■□□□□ 0.78
ZNF304Q9HCX3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF304Q9HCX3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF304Q9HCX3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ZNF304Q9HCX3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ZNF304Q9HCX3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF304Q9HCX3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF304Q9HCX3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.9■□□□□ 0.78
ZNF304Q9HCX3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNF304Q9HCX3 KRT16P2-201ENST00000414673 1423 ntBASIC19.9■□□□□ 0.78
ZNF304Q9HCX3 AC061975.6-201ENST00000579045 1553 ntBASIC19.9■□□□□ 0.78
ZNF304Q9HCX3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF304Q9HCX3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms