Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1BQ9H9Y6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.71■□□□□ 0.91
POLR1BQ9H9Y6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1BQ9H9Y6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1BQ9H9Y6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1BQ9H9Y6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.71■□□□□ 0.91
POLR1BQ9H9Y6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1BQ9H9Y6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.71■□□□□ 0.91
POLR1BQ9H9Y6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.71■□□□□ 0.91
POLR1BQ9H9Y6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1BQ9H9Y6 AC005181.1-201ENST00000604782 1256 ntBASIC20.71■□□□□ 0.91
POLR1BQ9H9Y6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.71■□□□□ 0.91
POLR1BQ9H9Y6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1BQ9H9Y6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
POLR1BQ9H9Y6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 SLC29A4P1-201ENST00000398760 971 ntBASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 SLC7A5P2-201ENST00000553010 536 ntBASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 DUX4L16-201ENST00000555130 1264 ntBASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
POLR1BQ9H9Y6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 AC005224.4-201ENST00000583262 1652 ntBASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 AC009237.3-201ENST00000393279 1427 ntBASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
POLR1BQ9H9Y6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR1BQ9H9Y6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1BQ9H9Y6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1BQ9H9Y6 AL121603.2-201ENST00000557373 2117 ntBASIC20.68■□□□□ 0.9
POLR1BQ9H9Y6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1BQ9H9Y6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1BQ9H9Y6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1BQ9H9Y6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1BQ9H9Y6 GUSBP6-202ENST00000438529 1198 ntBASIC20.68■□□□□ 0.9
POLR1BQ9H9Y6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.68■□□□□ 0.9
POLR1BQ9H9Y6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR1BQ9H9Y6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.68■□□□□ 0.9
POLR1BQ9H9Y6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR1BQ9H9Y6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.68■□□□□ 0.9
POLR1BQ9H9Y6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.68■□□□□ 0.9
POLR1BQ9H9Y6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
POLR1BQ9H9Y6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
POLR1BQ9H9Y6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1BQ9H9Y6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1BQ9H9Y6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1BQ9H9Y6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
POLR1BQ9H9Y6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.67■□□□□ 0.9
POLR1BQ9H9Y6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.67■□□□□ 0.9
POLR1BQ9H9Y6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1BQ9H9Y6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1BQ9H9Y6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.67■□□□□ 0.9
POLR1BQ9H9Y6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR1BQ9H9Y6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.67■□□□□ 0.9
POLR1BQ9H9Y6 UBE2DNL-204ENST00000602536 740 ntBASIC20.67■□□□□ 0.9
POLR1BQ9H9Y6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1BQ9H9Y6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR1BQ9H9Y6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1BQ9H9Y6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1BQ9H9Y6 AL353803.4-201ENST00000565882 1934 ntBASIC20.66■□□□□ 0.9
POLR1BQ9H9Y6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1BQ9H9Y6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
POLR1BQ9H9Y6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1BQ9H9Y6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
POLR1BQ9H9Y6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
POLR1BQ9H9Y6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.66■□□□□ 0.9
POLR1BQ9H9Y6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
POLR1BQ9H9Y6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1BQ9H9Y6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms