Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
SCAF1Q9H7N4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
SCAF1Q9H7N4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
SCAF1Q9H7N4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SCAF1Q9H7N4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
SCAF1Q9H7N4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
SCAF1Q9H7N4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SCAF1Q9H7N4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
SCAF1Q9H7N4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC31.1■■■□□ 2.57
SCAF1Q9H7N4 ECEL1P3-201ENST00000427961 737 ntBASIC31.1■■■□□ 2.57
SCAF1Q9H7N4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SCAF1Q9H7N4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC31.1■■■□□ 2.57
SCAF1Q9H7N4 AF201337.1-201ENST00000520239 748 ntBASIC31.1■■■□□ 2.57
SCAF1Q9H7N4 AC105036.2-201ENST00000569468 176 ntBASIC31.1■■■□□ 2.57
SCAF1Q9H7N4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC31.1■■■□□ 2.57
SCAF1Q9H7N4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
SCAF1Q9H7N4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
SCAF1Q9H7N4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
SCAF1Q9H7N4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
SCAF1Q9H7N4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
SCAF1Q9H7N4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
SCAF1Q9H7N4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC31.09■■■□□ 2.57
SCAF1Q9H7N4 DUX4L16-201ENST00000555130 1264 ntBASIC31.09■■■□□ 2.57
SCAF1Q9H7N4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC31.09■■■□□ 2.57
SCAF1Q9H7N4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC31.09■■■□□ 2.57
SCAF1Q9H7N4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SCAF1Q9H7N4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SCAF1Q9H7N4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SCAF1Q9H7N4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC31.08■■■□□ 2.57
SCAF1Q9H7N4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
SCAF1Q9H7N4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC31.08■■■□□ 2.57
SCAF1Q9H7N4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SCAF1Q9H7N4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
SCAF1Q9H7N4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SCAF1Q9H7N4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
SCAF1Q9H7N4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC31.07■■■□□ 2.57
SCAF1Q9H7N4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SCAF1Q9H7N4 ANOS2P-203ENST00000472227 1816 ntBASIC31.07■■■□□ 2.56
SCAF1Q9H7N4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
SCAF1Q9H7N4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC31.07■■■□□ 2.56
SCAF1Q9H7N4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SCAF1Q9H7N4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC31.07■■■□□ 2.56
SCAF1Q9H7N4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC31.07■■■□□ 2.56
SCAF1Q9H7N4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC31.07■■■□□ 2.56
SCAF1Q9H7N4 HLA-L-211ENST00000482052 1765 ntBASIC31.07■■■□□ 2.56
SCAF1Q9H7N4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SCAF1Q9H7N4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SCAF1Q9H7N4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SCAF1Q9H7N4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC31.06■■■□□ 2.56
SCAF1Q9H7N4 AC142381.4-202ENST00000563973 229 ntBASIC31.06■■■□□ 2.56
SCAF1Q9H7N4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC31.06■■■□□ 2.56
SCAF1Q9H7N4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
SCAF1Q9H7N4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SCAF1Q9H7N4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
SCAF1Q9H7N4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
SCAF1Q9H7N4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SCAF1Q9H7N4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
SCAF1Q9H7N4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC31.05■■■□□ 2.56
SCAF1Q9H7N4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC31.05■■■□□ 2.56
SCAF1Q9H7N4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC31.05■■■□□ 2.56
SCAF1Q9H7N4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SCAF1Q9H7N4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SCAF1Q9H7N4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SCAF1Q9H7N4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SCAF1Q9H7N4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
SCAF1Q9H7N4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
SCAF1Q9H7N4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SCAF1Q9H7N4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SCAF1Q9H7N4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
SCAF1Q9H7N4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SCAF1Q9H7N4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SCAF1Q9H7N4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC31.04■■■□□ 2.56
SCAF1Q9H7N4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC31.04■■■□□ 2.56
SCAF1Q9H7N4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
SCAF1Q9H7N4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
SCAF1Q9H7N4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
SCAF1Q9H7N4 AC242852.2-201ENST00000615738 1807 ntBASIC31.04■■■□□ 2.56
SCAF1Q9H7N4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC31.03■■■□□ 2.56
SCAF1Q9H7N4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SCAF1Q9H7N4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SCAF1Q9H7N4 FAM210CP-201ENST00000445714 574 ntBASIC31.03■■■□□ 2.56
SCAF1Q9H7N4 RARRES2P4-201ENST00000514074 484 ntBASIC31.03■■■□□ 2.56
SCAF1Q9H7N4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC31.03■■■□□ 2.56
SCAF1Q9H7N4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC31.03■■■□□ 2.56
SCAF1Q9H7N4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC31.03■■■□□ 2.56
SCAF1Q9H7N4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
SCAF1Q9H7N4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
SCAF1Q9H7N4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
SCAF1Q9H7N4 BX005040.4-201ENST00000637145 1518 ntBASIC31.03■■■□□ 2.56
SCAF1Q9H7N4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
SCAF1Q9H7N4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC31.03■■■□□ 2.56
SCAF1Q9H7N4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
SCAF1Q9H7N4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SCAF1Q9H7N4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC31.03■■■□□ 2.56
SCAF1Q9H7N4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
SCAF1Q9H7N4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC31.02■■■□□ 2.56
SCAF1Q9H7N4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC31.02■■■□□ 2.56
SCAF1Q9H7N4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
SCAF1Q9H7N4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC31.02■■■□□ 2.56
SCAF1Q9H7N4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC31.02■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms