Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHMP4BQ9H444 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
CHMP4BQ9H444 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHMP4BQ9H444 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.51■■□□□ 1.83
CHMP4BQ9H444 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHMP4BQ9H444 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHMP4BQ9H444 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHMP4BQ9H444 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC26.51■■□□□ 1.83
CHMP4BQ9H444 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC26.51■■□□□ 1.83
CHMP4BQ9H444 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC26.51■■□□□ 1.83
CHMP4BQ9H444 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC26.5■■□□□ 1.83
CHMP4BQ9H444 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CHMP4BQ9H444 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CHMP4BQ9H444 JTB-203ENST00000368589 1216 ntTSL 2 BASIC26.5■■□□□ 1.83
CHMP4BQ9H444 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CHMP4BQ9H444 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
CHMP4BQ9H444 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.5■■□□□ 1.83
CHMP4BQ9H444 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CHMP4BQ9H444 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CHMP4BQ9H444 AC005229.4-201ENST00000610085 2198 ntBASIC26.5■■□□□ 1.83
CHMP4BQ9H444 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHMP4BQ9H444 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC26.49■■□□□ 1.83
CHMP4BQ9H444 AC008175.2-201ENST00000612840 297 ntBASIC26.49■■□□□ 1.83
CHMP4BQ9H444 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHMP4BQ9H444 POU5F1P4-201ENST00000413175 1085 ntBASIC26.48■■□□□ 1.83
CHMP4BQ9H444 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CHMP4BQ9H444 YBX1P1-201ENST00000445822 960 ntBASIC26.48■■□□□ 1.83
CHMP4BQ9H444 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC26.48■■□□□ 1.83
CHMP4BQ9H444 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
CHMP4BQ9H444 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CHMP4BQ9H444 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHMP4BQ9H444 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC26.48■■□□□ 1.83
CHMP4BQ9H444 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHMP4BQ9H444 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHMP4BQ9H444 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHMP4BQ9H444 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC26.47■■□□□ 1.83
CHMP4BQ9H444 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC26.47■■□□□ 1.83
CHMP4BQ9H444 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CHMP4BQ9H444 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHMP4BQ9H444 EFS-203ENST00000429593 2610 ntTSL 2 BASIC26.47■■□□□ 1.83
CHMP4BQ9H444 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
CHMP4BQ9H444 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.46■■□□□ 1.83
CHMP4BQ9H444 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHMP4BQ9H444 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHMP4BQ9H444 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC26.46■■□□□ 1.83
CHMP4BQ9H444 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CHMP4BQ9H444 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHMP4BQ9H444 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC26.46■■□□□ 1.83
CHMP4BQ9H444 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
CHMP4BQ9H444 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC26.46■■□□□ 1.83
CHMP4BQ9H444 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHMP4BQ9H444 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC26.46■■□□□ 1.83
CHMP4BQ9H444 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHMP4BQ9H444 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CHMP4BQ9H444 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHMP4BQ9H444 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CHMP4BQ9H444 AP004607.4-201ENST00000530158 1459 ntBASIC26.45■■□□□ 1.82
CHMP4BQ9H444 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
CHMP4BQ9H444 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.45■■□□□ 1.82
CHMP4BQ9H444 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.45■■□□□ 1.82
CHMP4BQ9H444 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC26.45■■□□□ 1.82
CHMP4BQ9H444 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CHMP4BQ9H444 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC26.45■■□□□ 1.82
CHMP4BQ9H444 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
CHMP4BQ9H444 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC26.45■■□□□ 1.82
CHMP4BQ9H444 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHMP4BQ9H444 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC26.44■■□□□ 1.82
CHMP4BQ9H444 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC26.44■■□□□ 1.82
CHMP4BQ9H444 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHMP4BQ9H444 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
CHMP4BQ9H444 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CHMP4BQ9H444 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.44■■□□□ 1.82
CHMP4BQ9H444 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC26.44■■□□□ 1.82
CHMP4BQ9H444 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHMP4BQ9H444 AC138907.5-202ENST00000569484 235 ntBASIC26.44■■□□□ 1.82
CHMP4BQ9H444 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.44■■□□□ 1.82
CHMP4BQ9H444 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHMP4BQ9H444 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC26.44■■□□□ 1.82
CHMP4BQ9H444 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CHMP4BQ9H444 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHMP4BQ9H444 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
CHMP4BQ9H444 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHMP4BQ9H444 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC26.43■■□□□ 1.82
CHMP4BQ9H444 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHMP4BQ9H444 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHMP4BQ9H444 AF106564.1-201ENST00000607058 2553 ntBASIC26.43■■□□□ 1.82
CHMP4BQ9H444 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHMP4BQ9H444 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHMP4BQ9H444 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHMP4BQ9H444 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHMP4BQ9H444 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC26.42■■□□□ 1.82
CHMP4BQ9H444 TERF1P2-201ENST00000583350 1212 ntBASIC26.42■■□□□ 1.82
CHMP4BQ9H444 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CHMP4BQ9H444 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHMP4BQ9H444 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
CHMP4BQ9H444 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
CHMP4BQ9H444 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHMP4BQ9H444 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHMP4BQ9H444 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHMP4BQ9H444 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms