Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.14■□□□□ 0.17
MS4A6AQ9H2W1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.14■□□□□ 0.17
MS4A6AQ9H2W1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A6AQ9H2W1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A6AQ9H2W1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MS4A6AQ9H2W1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
MS4A6AQ9H2W1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
MS4A6AQ9H2W1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MS4A6AQ9H2W1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.13■□□□□ 0.17
MS4A6AQ9H2W1 IRS3P-201ENST00000223076 1006 ntBASIC16.13■□□□□ 0.17
MS4A6AQ9H2W1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
MS4A6AQ9H2W1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.13■□□□□ 0.17
MS4A6AQ9H2W1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.13■□□□□ 0.17
MS4A6AQ9H2W1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
MS4A6AQ9H2W1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.13■□□□□ 0.17
MS4A6AQ9H2W1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
MS4A6AQ9H2W1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MS4A6AQ9H2W1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MS4A6AQ9H2W1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.13■□□□□ 0.17
MS4A6AQ9H2W1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
MS4A6AQ9H2W1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 AC026310.3-201ENST00000625186 2373 ntBASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 AL354811.1-201ENST00000610286 706 ntBASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 AL358852.1-201ENST00000623174 1268 ntBASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 BX005040.4-201ENST00000637145 1518 ntBASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MS4A6AQ9H2W1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 AC012414.1-201ENST00000556676 535 ntBASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 AC010542.4-201ENST00000563151 1910 ntBASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 AC026471.6-201ENST00000622954 1905 ntBASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 AC009237.3-201ENST00000393279 1427 ntBASIC16.11■□□□□ 0.17
MS4A6AQ9H2W1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MS4A6AQ9H2W1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MS4A6AQ9H2W1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.1■□□□□ 0.17
MS4A6AQ9H2W1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.1■□□□□ 0.17
MS4A6AQ9H2W1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MS4A6AQ9H2W1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
MS4A6AQ9H2W1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.1■□□□□ 0.17
MS4A6AQ9H2W1 AC007952.6-201ENST00000573168 2673 ntBASIC16.1■□□□□ 0.17
MS4A6AQ9H2W1 AC003957.1-201ENST00000625108 2673 ntBASIC16.1■□□□□ 0.17
MS4A6AQ9H2W1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MS4A6AQ9H2W1 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.1■□□□□ 0.17
MS4A6AQ9H2W1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MS4A6AQ9H2W1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MS4A6AQ9H2W1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MS4A6AQ9H2W1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MS4A6AQ9H2W1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
MS4A6AQ9H2W1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
MS4A6AQ9H2W1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.1■□□□□ 0.17
MS4A6AQ9H2W1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.1■□□□□ 0.17
MS4A6AQ9H2W1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MS4A6AQ9H2W1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.09■□□□□ 0.17
MS4A6AQ9H2W1 AP006587.3-201ENST00000525742 1516 ntBASIC16.09■□□□□ 0.17
MS4A6AQ9H2W1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A6AQ9H2W1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
MS4A6AQ9H2W1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A6AQ9H2W1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.09■□□□□ 0.17
MS4A6AQ9H2W1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.09■□□□□ 0.17
MS4A6AQ9H2W1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
MS4A6AQ9H2W1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
MS4A6AQ9H2W1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms