Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDH23Q9H251 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDH23Q9H251 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDH23Q9H251 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDH23Q9H251 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDH23Q9H251 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDH23Q9H251 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
CDH23Q9H251 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDH23Q9H251 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDH23Q9H251 PNMA6B-201ENST00000538162 1200 ntBASIC22.61■■□□□ 1.21
CDH23Q9H251 LINC00526-201ENST00000581067 1875 ntBASIC22.61■■□□□ 1.21
CDH23Q9H251 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDH23Q9H251 AL139125.2-201ENST00000623134 1869 ntBASIC22.61■■□□□ 1.21
CDH23Q9H251 AL049637.2-201ENST00000641778 930 ntBASIC22.61■■□□□ 1.21
CDH23Q9H251 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.6■■□□□ 1.21
CDH23Q9H251 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDH23Q9H251 AC092368.3-202ENST00000574180 1591 ntBASIC22.6■■□□□ 1.21
CDH23Q9H251 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.6■■□□□ 1.21
CDH23Q9H251 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.6■■□□□ 1.21
CDH23Q9H251 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CDH23Q9H251 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CDH23Q9H251 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDH23Q9H251 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDH23Q9H251 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.6■■□□□ 1.21
CDH23Q9H251 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CDH23Q9H251 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.59■■□□□ 1.21
CDH23Q9H251 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDH23Q9H251 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDH23Q9H251 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CDH23Q9H251 POU5F1P4-201ENST00000413175 1085 ntBASIC22.59■■□□□ 1.21
CDH23Q9H251 AC145285.6-201ENST00000604632 637 ntBASIC22.59■■□□□ 1.21
CDH23Q9H251 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.59■■□□□ 1.21
CDH23Q9H251 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CDH23Q9H251 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
CDH23Q9H251 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDH23Q9H251 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CDH23Q9H251 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDH23Q9H251 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CDH23Q9H251 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC22.59■■□□□ 1.21
CDH23Q9H251 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.59■■□□□ 1.21
CDH23Q9H251 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDH23Q9H251 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.58■■□□□ 1.21
CDH23Q9H251 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.58■■□□□ 1.21
CDH23Q9H251 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC22.58■■□□□ 1.21
CDH23Q9H251 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDH23Q9H251 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.58■■□□□ 1.21
CDH23Q9H251 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDH23Q9H251 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
CDH23Q9H251 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.58■■□□□ 1.2
CDH23Q9H251 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.58■■□□□ 1.2
CDH23Q9H251 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.58■■□□□ 1.2
CDH23Q9H251 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.58■■□□□ 1.2
CDH23Q9H251 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.58■■□□□ 1.2
CDH23Q9H251 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.57■■□□□ 1.2
CDH23Q9H251 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CDH23Q9H251 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDH23Q9H251 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDH23Q9H251 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.57■■□□□ 1.2
CDH23Q9H251 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDH23Q9H251 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDH23Q9H251 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDH23Q9H251 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.57■■□□□ 1.2
CDH23Q9H251 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDH23Q9H251 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDH23Q9H251 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDH23Q9H251 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDH23Q9H251 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.56■■□□□ 1.2
CDH23Q9H251 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDH23Q9H251 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDH23Q9H251 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC22.56■■□□□ 1.2
CDH23Q9H251 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
CDH23Q9H251 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.56■■□□□ 1.2
CDH23Q9H251 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDH23Q9H251 ARMC10P1-201ENST00000313754 855 ntBASIC22.56■■□□□ 1.2
CDH23Q9H251 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDH23Q9H251 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC22.56■■□□□ 1.2
CDH23Q9H251 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.56■■□□□ 1.2
CDH23Q9H251 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDH23Q9H251 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDH23Q9H251 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDH23Q9H251 AL591742.1-201ENST00000604433 565 ntBASIC22.55■■□□□ 1.2
CDH23Q9H251 AL353708.3-201ENST00000610272 989 ntBASIC22.55■■□□□ 1.2
CDH23Q9H251 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDH23Q9H251 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.55■■□□□ 1.2
CDH23Q9H251 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CDH23Q9H251 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDH23Q9H251 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDH23Q9H251 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.55■■□□□ 1.2
CDH23Q9H251 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDH23Q9H251 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.55■■□□□ 1.2
CDH23Q9H251 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDH23Q9H251 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC22.55■■□□□ 1.2
CDH23Q9H251 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC22.55■■□□□ 1.2
CDH23Q9H251 SOX15-203ENST00000570788 1093 ntBASIC22.55■■□□□ 1.2
CDH23Q9H251 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDH23Q9H251 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.55■■□□□ 1.2
CDH23Q9H251 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.55■■□□□ 1.2
CDH23Q9H251 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDH23Q9H251 KRT17P3-201ENST00000420566 1262 ntBASIC22.54■■□□□ 1.2
CDH23Q9H251 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms