Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 FKBP1A-202ENST00000381719 747 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 AL121978.1-201ENST00000402778 359 ntBASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 KRASP1-201ENST00000407852 552 ntBASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 TLE1P1-201ENST00000422965 589 ntBASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 AL353706.1-201ENST00000436728 494 ntBASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 MTND5P8-201ENST00000449817 1083 ntBASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 RAP1BP2-201ENST00000478270 544 ntBASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 BTF3L4-204ENST00000484036 941 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 AC117525.1-201ENST00000515228 503 ntBASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 AC093014.1-201ENST00000548926 724 ntBASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 AC009119.1-203ENST00000565064 577 ntTSL 4 BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 AP005482.3-201ENST00000585877 720 ntBASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 AC010978.1-206ENST00000598281 828 ntTSL 5 BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 WASH5P-204ENST00000632292 975 ntBASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 NR1H4-209ENST00000551379 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP3-3Q9BYR6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 MS4A6E-201ENST00000300182 711 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 NTF3-201ENST00000331010 1028 ntAPPRIS P3 BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 RPS8-202ENST00000396651 881 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 AL356320.2-201ENST00000417263 507 ntBASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 LINC00443-201ENST00000421601 1170 ntTSL 3 BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 AC006355.1-201ENST00000440982 1012 ntBASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 AC073648.4-201ENST00000442655 781 ntBASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 OR7E121P-201ENST00000494533 1022 ntBASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 AC021820.1-201ENST00000525564 808 ntBASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 AC139099.1-203ENST00000570366 607 ntTSL 3 BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 PIGPP4-201ENST00000584447 307 ntBASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 AC008686.1-201ENST00000586894 565 ntTSL 5 BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 LINC00662-207ENST00000590677 883 ntTSL 5 BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 AC139792.1-201ENST00000607051 647 ntBASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 AC104237.3-201ENST00000611809 427 ntBASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 AC011447.5-201ENST00000616168 564 ntBASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 TSN-202ENST00000409193 1436 ntTSL 5 BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 ACMSD-201ENST00000356140 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 ACMSD-202ENST00000392928 1307 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 FLJ22447-202ENST00000556569 1312 ntTSL 2 BASIC12.88□□□□□ -0.35
KRTAP3-3Q9BYR6 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 GLYATL2-202ENST00000532258 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 CRABP2-203ENST00000368222 992 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 HNF4GP1-201ENST00000430567 1249 ntBASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 RPL34P26-201ENST00000445636 354 ntBASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 AC023590.1-203ENST00000449065 411 ntTSL 3 BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 AL356800.1-201ENST00000553339 735 ntBASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 AC005252.1-201ENST00000604518 1063 ntBASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 AC079414.3-201ENST00000612986 1090 ntBASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 PIBF1-207ENST00000615625 1098 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 MND1-206ENST00000622785 830 ntTSL 2 BASIC12.87□□□□□ -0.35
KRTAP3-3Q9BYR6 AC013437.2-201ENST00000639587 677 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms