Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 POU5F1P4-201ENST00000413175 1085 ntBASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SSBP3Q9BWW4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSBP3Q9BWW4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSBP3Q9BWW4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSBP3Q9BWW4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SSBP3Q9BWW4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSBP3Q9BWW4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSBP3Q9BWW4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSBP3Q9BWW4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.51■□□□□ 0.39
SSBP3Q9BWW4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
SSBP3Q9BWW4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.51■□□□□ 0.39
SSBP3Q9BWW4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSBP3Q9BWW4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSBP3Q9BWW4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSBP3Q9BWW4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SSBP3Q9BWW4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSBP3Q9BWW4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 RAP2CP1-201ENST00000605103 478 ntBASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 AC231657.2-201ENST00000624556 255 ntBASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
SSBP3Q9BWW4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSBP3Q9BWW4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSBP3Q9BWW4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSBP3Q9BWW4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.49■□□□□ 0.39
SSBP3Q9BWW4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.49■□□□□ 0.39
SSBP3Q9BWW4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSBP3Q9BWW4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
SSBP3Q9BWW4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSBP3Q9BWW4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSBP3Q9BWW4 AC006970.2-201ENST00000450065 779 ntBASIC17.49■□□□□ 0.39
SSBP3Q9BWW4 SLC7A5P1-201ENST00000568957 537 ntBASIC17.49■□□□□ 0.39
SSBP3Q9BWW4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSBP3Q9BWW4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SSBP3Q9BWW4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSBP3Q9BWW4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSBP3Q9BWW4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSBP3Q9BWW4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSBP3Q9BWW4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.49■□□□□ 0.39
SSBP3Q9BWW4 AC026471.6-201ENST00000622954 1905 ntBASIC17.49■□□□□ 0.39
SSBP3Q9BWW4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 SLC7A5P2-201ENST00000553010 536 ntBASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 AC010536.3-201ENST00000620306 533 ntBASIC17.48■□□□□ 0.39
SSBP3Q9BWW4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms