Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.77■□□□□ 0.76
CPPED1Q9BRF8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPPED1Q9BRF8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
CPPED1Q9BRF8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPPED1Q9BRF8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CPPED1Q9BRF8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
CPPED1Q9BRF8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CPPED1Q9BRF8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
CPPED1Q9BRF8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 AC073314.1-201ENST00000568729 2216 ntBASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPPED1Q9BRF8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CPPED1Q9BRF8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CPPED1Q9BRF8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CPPED1Q9BRF8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPPED1Q9BRF8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPPED1Q9BRF8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.75■□□□□ 0.75
CPPED1Q9BRF8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.75■□□□□ 0.75
CPPED1Q9BRF8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPPED1Q9BRF8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.75■□□□□ 0.75
CPPED1Q9BRF8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPPED1Q9BRF8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPPED1Q9BRF8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPPED1Q9BRF8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CPPED1Q9BRF8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPPED1Q9BRF8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPPED1Q9BRF8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPPED1Q9BRF8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CPPED1Q9BRF8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.74■□□□□ 0.75
CPPED1Q9BRF8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPPED1Q9BRF8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPPED1Q9BRF8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CPPED1Q9BRF8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPPED1Q9BRF8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.74■□□□□ 0.75
CPPED1Q9BRF8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPPED1Q9BRF8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPPED1Q9BRF8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPPED1Q9BRF8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPPED1Q9BRF8 BX842568.3-201ENST00000418104 571 ntBASIC19.74■□□□□ 0.75
CPPED1Q9BRF8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CPPED1Q9BRF8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPPED1Q9BRF8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.74■□□□□ 0.75
CPPED1Q9BRF8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPPED1Q9BRF8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPPED1Q9BRF8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CPPED1Q9BRF8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.74■□□□□ 0.75
CPPED1Q9BRF8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPPED1Q9BRF8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CPPED1Q9BRF8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CPPED1Q9BRF8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CPPED1Q9BRF8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CPPED1Q9BRF8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPPED1Q9BRF8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.73■□□□□ 0.75
CPPED1Q9BRF8 MIR4767-201ENST00000582827 78 ntBASIC19.73■□□□□ 0.75
CPPED1Q9BRF8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.73■□□□□ 0.75
CPPED1Q9BRF8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.73■□□□□ 0.75
CPPED1Q9BRF8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CPPED1Q9BRF8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CPPED1Q9BRF8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPPED1Q9BRF8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CPPED1Q9BRF8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CPPED1Q9BRF8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.72■□□□□ 0.75
CPPED1Q9BRF8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CPPED1Q9BRF8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CPPED1Q9BRF8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
CPPED1Q9BRF8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPPED1Q9BRF8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPPED1Q9BRF8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CPPED1Q9BRF8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.72■□□□□ 0.75
CPPED1Q9BRF8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CPPED1Q9BRF8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPPED1Q9BRF8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPPED1Q9BRF8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CPPED1Q9BRF8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CPPED1Q9BRF8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
CPPED1Q9BRF8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPPED1Q9BRF8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.71■□□□□ 0.75
CPPED1Q9BRF8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms