Protein–RNA interactions for Protein: Q96H20

SNF8, Vacuolar-sorting protein SNF8, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8Q96H20 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNF8Q96H20 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNF8Q96H20 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNF8Q96H20 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNF8Q96H20 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNF8Q96H20 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.59■■□□□ 1.05
SNF8Q96H20 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
SNF8Q96H20 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
SNF8Q96H20 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.58■■□□□ 1.05
SNF8Q96H20 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.58■■□□□ 1.05
SNF8Q96H20 AP005212.1-201ENST00000581547 1997 ntBASIC21.58■■□□□ 1.05
SNF8Q96H20 PLK5-205ENST00000642079 1969 ntBASIC21.58■■□□□ 1.05
SNF8Q96H20 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
SNF8Q96H20 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.58■■□□□ 1.05
SNF8Q96H20 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNF8Q96H20 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SNF8Q96H20 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SNF8Q96H20 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.58■■□□□ 1.05
SNF8Q96H20 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNF8Q96H20 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNF8Q96H20 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.58■■□□□ 1.05
SNF8Q96H20 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SNF8Q96H20 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.58■■□□□ 1.04
SNF8Q96H20 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SNF8Q96H20 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
SNF8Q96H20 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNF8Q96H20 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNF8Q96H20 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SNF8Q96H20 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.57■■□□□ 1.04
SNF8Q96H20 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.57■■□□□ 1.04
SNF8Q96H20 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNF8Q96H20 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNF8Q96H20 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNF8Q96H20 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNF8Q96H20 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.57■■□□□ 1.04
SNF8Q96H20 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.57■■□□□ 1.04
SNF8Q96H20 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.57■■□□□ 1.04
SNF8Q96H20 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.57■■□□□ 1.04
SNF8Q96H20 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SNF8Q96H20 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNF8Q96H20 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.57■■□□□ 1.04
SNF8Q96H20 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNF8Q96H20 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNF8Q96H20 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNF8Q96H20 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNF8Q96H20 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNF8Q96H20 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNF8Q96H20 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
SNF8Q96H20 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNF8Q96H20 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.56■■□□□ 1.04
SNF8Q96H20 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNF8Q96H20 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNF8Q96H20 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.56■■□□□ 1.04
SNF8Q96H20 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.56■■□□□ 1.04
SNF8Q96H20 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.56■■□□□ 1.04
SNF8Q96H20 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.56■■□□□ 1.04
SNF8Q96H20 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNF8Q96H20 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNF8Q96H20 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNF8Q96H20 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNF8Q96H20 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNF8Q96H20 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNF8Q96H20 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNF8Q96H20 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNF8Q96H20 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.56■■□□□ 1.04
SNF8Q96H20 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.55■■□□□ 1.04
SNF8Q96H20 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNF8Q96H20 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNF8Q96H20 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNF8Q96H20 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNF8Q96H20 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNF8Q96H20 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SNF8Q96H20 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.55■■□□□ 1.04
SNF8Q96H20 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNF8Q96H20 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.55■■□□□ 1.04
SNF8Q96H20 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.55■■□□□ 1.04
SNF8Q96H20 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.55■■□□□ 1.04
SNF8Q96H20 MIR4466-201ENST00000606121 54 ntBASIC21.55■■□□□ 1.04
SNF8Q96H20 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.55■■□□□ 1.04
SNF8Q96H20 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SNF8Q96H20 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.55■■□□□ 1.04
SNF8Q96H20 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNF8Q96H20 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SNF8Q96H20 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNF8Q96H20 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SNF8Q96H20 AC073314.1-201ENST00000568729 2216 ntBASIC21.55■■□□□ 1.04
SNF8Q96H20 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.55■■□□□ 1.04
SNF8Q96H20 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.55■■□□□ 1.04
SNF8Q96H20 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNF8Q96H20 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SNF8Q96H20 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNF8Q96H20 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SNF8Q96H20 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.54■■□□□ 1.04
SNF8Q96H20 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNF8Q96H20 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNF8Q96H20 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNF8Q96H20 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
SNF8Q96H20 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNF8Q96H20 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.54■■□□□ 1.04
SNF8Q96H20 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms