Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SLC47A1Q96FL8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC47A1Q96FL8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC47A1Q96FL8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC47A1Q96FL8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC47A1Q96FL8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC47A1Q96FL8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SLC47A1Q96FL8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 AC131281.2-201ENST00000520478 145 ntBASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC47A1Q96FL8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.77■□□□□ 0.75
SLC47A1Q96FL8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC47A1Q96FL8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.76■□□□□ 0.75
SLC47A1Q96FL8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC47A1Q96FL8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC47A1Q96FL8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC47A1Q96FL8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
SLC47A1Q96FL8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
SLC47A1Q96FL8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC47A1Q96FL8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC47A1Q96FL8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC47A1Q96FL8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC47A1Q96FL8 SERBP1P1-201ENST00000396021 1160 ntBASIC19.76■□□□□ 0.75
SLC47A1Q96FL8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC47A1Q96FL8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC47A1Q96FL8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC47A1Q96FL8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SLC47A1Q96FL8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SLC47A1Q96FL8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SLC47A1Q96FL8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC47A1Q96FL8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC47A1Q96FL8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC47A1Q96FL8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.75■□□□□ 0.75
SLC47A1Q96FL8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SLC47A1Q96FL8 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC47A1Q96FL8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC47A1Q96FL8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC47A1Q96FL8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC47A1Q96FL8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC47A1Q96FL8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC47A1Q96FL8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
SLC47A1Q96FL8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
SLC47A1Q96FL8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SLC47A1Q96FL8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
SLC47A1Q96FL8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC47A1Q96FL8 AL034346.1-201ENST00000568244 1277 ntBASIC19.74■□□□□ 0.75
SLC47A1Q96FL8 AC011298.3-201ENST00000615796 283 ntBASIC19.74■□□□□ 0.75
SLC47A1Q96FL8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SLC47A1Q96FL8 AC003102.1-202ENST00000563394 1796 ntBASIC19.74■□□□□ 0.75
SLC47A1Q96FL8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC47A1Q96FL8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SLC47A1Q96FL8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC47A1Q96FL8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC47A1Q96FL8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC47A1Q96FL8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC47A1Q96FL8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC47A1Q96FL8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC47A1Q96FL8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC47A1Q96FL8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC47A1Q96FL8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SLC47A1Q96FL8 AC010141.3-201ENST00000456659 717 ntBASIC19.73■□□□□ 0.75
SLC47A1Q96FL8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.73■□□□□ 0.75
SLC47A1Q96FL8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC47A1Q96FL8 AC136469.2-201ENST00000623944 1028 ntBASIC19.73■□□□□ 0.75
SLC47A1Q96FL8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
SLC47A1Q96FL8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC47A1Q96FL8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC47A1Q96FL8 GABARAPL3-202ENST00000624044 1851 ntBASIC19.73■□□□□ 0.75
SLC47A1Q96FL8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC47A1Q96FL8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC47A1Q96FL8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC47A1Q96FL8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC47A1Q96FL8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC47A1Q96FL8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC47A1Q96FL8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC47A1Q96FL8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC47A1Q96FL8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC47A1Q96FL8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC47A1Q96FL8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC47A1Q96FL8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC47A1Q96FL8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC47A1Q96FL8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms