Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.23■□□□□ 0.99
LRRC39Q96DD0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC39Q96DD0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC39Q96DD0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC39Q96DD0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC39Q96DD0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC39Q96DD0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.23■□□□□ 0.99
LRRC39Q96DD0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.23■□□□□ 0.99
LRRC39Q96DD0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
LRRC39Q96DD0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC39Q96DD0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC39Q96DD0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC39Q96DD0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC39Q96DD0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC39Q96DD0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
LRRC39Q96DD0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC39Q96DD0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC39Q96DD0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.22■□□□□ 0.99
LRRC39Q96DD0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC39Q96DD0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC39Q96DD0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
LRRC39Q96DD0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
LRRC39Q96DD0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC39Q96DD0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.21■□□□□ 0.99
LRRC39Q96DD0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC39Q96DD0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC39Q96DD0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC39Q96DD0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC39Q96DD0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.21■□□□□ 0.99
LRRC39Q96DD0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC39Q96DD0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC39Q96DD0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
LRRC39Q96DD0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC39Q96DD0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
LRRC39Q96DD0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC39Q96DD0 SLC25A24-204ENST00000569674 2357 ntBASIC21.21■□□□□ 0.99
LRRC39Q96DD0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
LRRC39Q96DD0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC39Q96DD0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.21■□□□□ 0.99
LRRC39Q96DD0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LRRC39Q96DD0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LRRC39Q96DD0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
LRRC39Q96DD0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC39Q96DD0 AC005224.4-201ENST00000583262 1652 ntBASIC21.21■□□□□ 0.99
LRRC39Q96DD0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC39Q96DD0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC39Q96DD0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.2■□□□□ 0.98
LRRC39Q96DD0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
LRRC39Q96DD0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.2■□□□□ 0.98
LRRC39Q96DD0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
LRRC39Q96DD0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC39Q96DD0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC39Q96DD0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.2■□□□□ 0.98
LRRC39Q96DD0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.2■□□□□ 0.98
LRRC39Q96DD0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.2■□□□□ 0.98
LRRC39Q96DD0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC39Q96DD0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC39Q96DD0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC39Q96DD0 PLK5-205ENST00000642079 1969 ntBASIC21.19■□□□□ 0.98
LRRC39Q96DD0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.19■□□□□ 0.98
LRRC39Q96DD0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC39Q96DD0 LINC01006-201ENST00000333319 2292 ntBASIC21.19■□□□□ 0.98
LRRC39Q96DD0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC39Q96DD0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC39Q96DD0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.19■□□□□ 0.98
LRRC39Q96DD0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
LRRC39Q96DD0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.19■□□□□ 0.98
LRRC39Q96DD0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC39Q96DD0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC39Q96DD0 AC105233.4-201ENST00000642045 216 ntBASIC21.19■□□□□ 0.98
LRRC39Q96DD0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LRRC39Q96DD0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC39Q96DD0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
LRRC39Q96DD0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC39Q96DD0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
LRRC39Q96DD0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC39Q96DD0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC39Q96DD0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC39Q96DD0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
LRRC39Q96DD0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC39Q96DD0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
LRRC39Q96DD0 AC027682.1-201ENST00000562846 899 ntBASIC21.18■□□□□ 0.98
LRRC39Q96DD0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.18■□□□□ 0.98
LRRC39Q96DD0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
LRRC39Q96DD0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
LRRC39Q96DD0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.18■□□□□ 0.98
LRRC39Q96DD0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
LRRC39Q96DD0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC39Q96DD0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRC39Q96DD0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LRRC39Q96DD0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC39Q96DD0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC39Q96DD0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC39Q96DD0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC39Q96DD0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC39Q96DD0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.17■□□□□ 0.98
LRRC39Q96DD0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.17■□□□□ 0.98
LRRC39Q96DD0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC39Q96DD0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.17■□□□□ 0.98
LRRC39Q96DD0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms