Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
APH1AQ96BI3 AC004911.1-201ENST00000416316 871 ntBASIC18.62■□□□□ 0.57
APH1AQ96BI3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APH1AQ96BI3 BID-214ENST00000617586 542 ntTSL 5 BASIC18.62■□□□□ 0.57
APH1AQ96BI3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
APH1AQ96BI3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APH1AQ96BI3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
APH1AQ96BI3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
APH1AQ96BI3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.62■□□□□ 0.57
APH1AQ96BI3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.62■□□□□ 0.57
APH1AQ96BI3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APH1AQ96BI3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APH1AQ96BI3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APH1AQ96BI3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APH1AQ96BI3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APH1AQ96BI3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APH1AQ96BI3 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.62■□□□□ 0.57
APH1AQ96BI3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APH1AQ96BI3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
APH1AQ96BI3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.62■□□□□ 0.57
APH1AQ96BI3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.62■□□□□ 0.57
APH1AQ96BI3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APH1AQ96BI3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
APH1AQ96BI3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
APH1AQ96BI3 FBXW4P1-201ENST00000426721 2239 ntBASIC18.61■□□□□ 0.57
APH1AQ96BI3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.61■□□□□ 0.57
APH1AQ96BI3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.61■□□□□ 0.57
APH1AQ96BI3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APH1AQ96BI3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.61■□□□□ 0.57
APH1AQ96BI3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APH1AQ96BI3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APH1AQ96BI3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APH1AQ96BI3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APH1AQ96BI3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
APH1AQ96BI3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
APH1AQ96BI3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
APH1AQ96BI3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.61■□□□□ 0.57
APH1AQ96BI3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.61■□□□□ 0.57
APH1AQ96BI3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
APH1AQ96BI3 MYCNOS-205ENST00000641950 531 ntBASIC18.61■□□□□ 0.57
APH1AQ96BI3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.61■□□□□ 0.57
APH1AQ96BI3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.61■□□□□ 0.57
APH1AQ96BI3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
APH1AQ96BI3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
APH1AQ96BI3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
APH1AQ96BI3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
APH1AQ96BI3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.6■□□□□ 0.57
APH1AQ96BI3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
APH1AQ96BI3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APH1AQ96BI3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APH1AQ96BI3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
APH1AQ96BI3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
APH1AQ96BI3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APH1AQ96BI3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.6■□□□□ 0.57
APH1AQ96BI3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.6■□□□□ 0.57
APH1AQ96BI3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
APH1AQ96BI3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.6■□□□□ 0.57
APH1AQ96BI3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.6■□□□□ 0.57
APH1AQ96BI3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
APH1AQ96BI3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APH1AQ96BI3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APH1AQ96BI3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APH1AQ96BI3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
APH1AQ96BI3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
APH1AQ96BI3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
APH1AQ96BI3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
APH1AQ96BI3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
APH1AQ96BI3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
APH1AQ96BI3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.59■□□□□ 0.57
APH1AQ96BI3 AC061975.6-201ENST00000579045 1553 ntBASIC18.59■□□□□ 0.57
APH1AQ96BI3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
APH1AQ96BI3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
APH1AQ96BI3 KRT16P2-201ENST00000414673 1423 ntBASIC18.59■□□□□ 0.57
APH1AQ96BI3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APH1AQ96BI3 AC079834.2-201ENST00000609776 1949 ntBASIC18.59■□□□□ 0.57
APH1AQ96BI3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
APH1AQ96BI3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
APH1AQ96BI3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APH1AQ96BI3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
APH1AQ96BI3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
APH1AQ96BI3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.59■□□□□ 0.57
APH1AQ96BI3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.59■□□□□ 0.57
APH1AQ96BI3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
APH1AQ96BI3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.59■□□□□ 0.57
APH1AQ96BI3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
APH1AQ96BI3 SLC7A5P2-201ENST00000553010 536 ntBASIC18.59■□□□□ 0.57
APH1AQ96BI3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.59■□□□□ 0.57
APH1AQ96BI3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.59■□□□□ 0.57
APH1AQ96BI3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APH1AQ96BI3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.59■□□□□ 0.57
APH1AQ96BI3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.59■□□□□ 0.57
APH1AQ96BI3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APH1AQ96BI3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
APH1AQ96BI3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
APH1AQ96BI3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APH1AQ96BI3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APH1AQ96BI3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
APH1AQ96BI3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
APH1AQ96BI3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
APH1AQ96BI3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms