Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF25Q96BH1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.03■■□□□ 1.12
RNF25Q96BH1 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC22.03■■□□□ 1.12
RNF25Q96BH1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF25Q96BH1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF25Q96BH1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
RNF25Q96BH1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
RNF25Q96BH1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.03■■□□□ 1.12
RNF25Q96BH1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF25Q96BH1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF25Q96BH1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
RNF25Q96BH1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
RNF25Q96BH1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
RNF25Q96BH1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.02■■□□□ 1.12
RNF25Q96BH1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
RNF25Q96BH1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
RNF25Q96BH1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF25Q96BH1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF25Q96BH1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.02■■□□□ 1.12
RNF25Q96BH1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.02■■□□□ 1.12
RNF25Q96BH1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF25Q96BH1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF25Q96BH1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RNF25Q96BH1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF25Q96BH1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF25Q96BH1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.02■■□□□ 1.12
RNF25Q96BH1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.02■■□□□ 1.12
RNF25Q96BH1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RNF25Q96BH1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
RNF25Q96BH1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.01■■□□□ 1.11
RNF25Q96BH1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF25Q96BH1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF25Q96BH1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
RNF25Q96BH1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RNF25Q96BH1 MIR939-201ENST00000401314 82 ntBASIC22.01■■□□□ 1.11
RNF25Q96BH1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.01■■□□□ 1.11
RNF25Q96BH1 AL031432.3-201ENST00000607698 485 ntBASIC22.01■■□□□ 1.11
RNF25Q96BH1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RNF25Q96BH1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF25Q96BH1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RNF25Q96BH1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF25Q96BH1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF25Q96BH1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RNF25Q96BH1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF25Q96BH1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF25Q96BH1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF25Q96BH1 RASA4CP-201ENST00000424092 1398 ntBASIC22■■□□□ 1.11
RNF25Q96BH1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
RNF25Q96BH1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
RNF25Q96BH1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22■■□□□ 1.11
RNF25Q96BH1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22■■□□□ 1.11
RNF25Q96BH1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22■■□□□ 1.11
RNF25Q96BH1 AL136967.2-201ENST00000623968 743 ntBASIC22■■□□□ 1.11
RNF25Q96BH1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22■■□□□ 1.11
RNF25Q96BH1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF25Q96BH1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF25Q96BH1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF25Q96BH1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22■■□□□ 1.11
RNF25Q96BH1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.99■■□□□ 1.11
RNF25Q96BH1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.99■■□□□ 1.11
RNF25Q96BH1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF25Q96BH1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF25Q96BH1 AC009237.3-201ENST00000393279 1427 ntBASIC21.99■■□□□ 1.11
RNF25Q96BH1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF25Q96BH1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF25Q96BH1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF25Q96BH1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF25Q96BH1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF25Q96BH1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF25Q96BH1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF25Q96BH1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF25Q96BH1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.99■■□□□ 1.11
RNF25Q96BH1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF25Q96BH1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RNF25Q96BH1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF25Q96BH1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF25Q96BH1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.98■■□□□ 1.11
RNF25Q96BH1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.98■■□□□ 1.11
RNF25Q96BH1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF25Q96BH1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.98■■□□□ 1.11
RNF25Q96BH1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF25Q96BH1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF25Q96BH1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RNF25Q96BH1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.98■■□□□ 1.11
RNF25Q96BH1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF25Q96BH1 LINC01521-201ENST00000504184 1943 ntBASIC21.98■■□□□ 1.11
RNF25Q96BH1 AC055733.4-201ENST00000638462 1354 ntBASIC21.98■■□□□ 1.11
RNF25Q96BH1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF25Q96BH1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF25Q96BH1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF25Q96BH1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF25Q96BH1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF25Q96BH1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
RNF25Q96BH1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.97■■□□□ 1.11
RNF25Q96BH1 AL049796.1-201ENST00000565336 1766 ntBASIC21.97■■□□□ 1.11
RNF25Q96BH1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF25Q96BH1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF25Q96BH1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF25Q96BH1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF25Q96BH1 MIR572-201ENST00000384983 95 ntBASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms