Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 AC061975.6-201ENST00000579045 1553 ntBASIC18.56■□□□□ 0.56
TMEM54Q969K7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM54Q969K7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM54Q969K7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.56■□□□□ 0.56
TMEM54Q969K7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM54Q969K7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TMEM54Q969K7 POU5F1P4-201ENST00000413175 1085 ntBASIC18.56■□□□□ 0.56
TMEM54Q969K7 AC010141.2-201ENST00000452426 721 ntBASIC18.56■□□□□ 0.56
TMEM54Q969K7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM54Q969K7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.56■□□□□ 0.56
TMEM54Q969K7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.56■□□□□ 0.56
TMEM54Q969K7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.56■□□□□ 0.56
TMEM54Q969K7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TMEM54Q969K7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM54Q969K7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM54Q969K7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM54Q969K7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM54Q969K7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM54Q969K7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TMEM54Q969K7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.55■□□□□ 0.56
TMEM54Q969K7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM54Q969K7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM54Q969K7 AC034268.1-201ENST00000441047 882 ntBASIC18.55■□□□□ 0.56
TMEM54Q969K7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM54Q969K7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.55■□□□□ 0.56
TMEM54Q969K7 AL049796.1-201ENST00000565336 1766 ntBASIC18.55■□□□□ 0.56
TMEM54Q969K7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM54Q969K7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM54Q969K7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TMEM54Q969K7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM54Q969K7 AC005229.4-201ENST00000610085 2198 ntBASIC18.54■□□□□ 0.56
TMEM54Q969K7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM54Q969K7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.54■□□□□ 0.56
TMEM54Q969K7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM54Q969K7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM54Q969K7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.54■□□□□ 0.56
TMEM54Q969K7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
TMEM54Q969K7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.54■□□□□ 0.56
TMEM54Q969K7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM54Q969K7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM54Q969K7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.54■□□□□ 0.56
TMEM54Q969K7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.54■□□□□ 0.56
TMEM54Q969K7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.54■□□□□ 0.56
TMEM54Q969K7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.54■□□□□ 0.56
TMEM54Q969K7 AC087623.3-201ENST00000607047 1098 ntBASIC18.54■□□□□ 0.56
TMEM54Q969K7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM54Q969K7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.54■□□□□ 0.56
TMEM54Q969K7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM54Q969K7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM54Q969K7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM54Q969K7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM54Q969K7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM54Q969K7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM54Q969K7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM54Q969K7 AF106564.1-201ENST00000607058 2553 ntBASIC18.53■□□□□ 0.56
TMEM54Q969K7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM54Q969K7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TMEM54Q969K7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM54Q969K7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEM54Q969K7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TMEM54Q969K7 AC026271.2-201ENST00000428091 497 ntBASIC18.53■□□□□ 0.56
TMEM54Q969K7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.53■□□□□ 0.56
TMEM54Q969K7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEM54Q969K7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM54Q969K7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEM54Q969K7 KRT18P61-201ENST00000585825 1298 ntBASIC18.53■□□□□ 0.56
TMEM54Q969K7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM54Q969K7 AP001160.3-201ENST00000601484 763 ntBASIC18.53■□□□□ 0.56
TMEM54Q969K7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TMEM54Q969K7 AL137060.1-201ENST00000618151 2648 ntBASIC18.53■□□□□ 0.56
TMEM54Q969K7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM54Q969K7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
TMEM54Q969K7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TMEM54Q969K7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TMEM54Q969K7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
TMEM54Q969K7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEM54Q969K7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEM54Q969K7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TMEM54Q969K7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM54Q969K7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TMEM54Q969K7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.52■□□□□ 0.56
TMEM54Q969K7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM54Q969K7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM54Q969K7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM54Q969K7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.52■□□□□ 0.56
TMEM54Q969K7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TMEM54Q969K7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.52■□□□□ 0.56
TMEM54Q969K7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.52■□□□□ 0.56
TMEM54Q969K7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.52■□□□□ 0.56
TMEM54Q969K7 RARRES2P6-201ENST00000567333 442 ntBASIC18.52■□□□□ 0.56
TMEM54Q969K7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.52■□□□□ 0.56
TMEM54Q969K7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TMEM54Q969K7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TMEM54Q969K7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.52■□□□□ 0.56
TMEM54Q969K7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
TMEM54Q969K7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.52■□□□□ 0.55
TMEM54Q969K7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.51■□□□□ 0.55
TMEM54Q969K7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM54Q969K7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TMEM54Q969K7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms