Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP9XQ93008 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
USP9XQ93008 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP9XQ93008 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP9XQ93008 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.54■□□□□ 0.56
USP9XQ93008 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.54■□□□□ 0.56
USP9XQ93008 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.54■□□□□ 0.56
USP9XQ93008 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.54■□□□□ 0.56
USP9XQ93008 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP9XQ93008 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP9XQ93008 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.54■□□□□ 0.56
USP9XQ93008 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
USP9XQ93008 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP9XQ93008 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP9XQ93008 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP9XQ93008 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP9XQ93008 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
USP9XQ93008 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP9XQ93008 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.54■□□□□ 0.56
USP9XQ93008 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP9XQ93008 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
USP9XQ93008 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.54■□□□□ 0.56
USP9XQ93008 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP9XQ93008 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP9XQ93008 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP9XQ93008 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP9XQ93008 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
USP9XQ93008 AL034346.1-201ENST00000568244 1277 ntBASIC18.53■□□□□ 0.56
USP9XQ93008 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.53■□□□□ 0.56
USP9XQ93008 AL121906.2-201ENST00000621597 723 ntBASIC18.53■□□□□ 0.56
USP9XQ93008 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP9XQ93008 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP9XQ93008 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP9XQ93008 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP9XQ93008 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP9XQ93008 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.53■□□□□ 0.56
USP9XQ93008 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.53■□□□□ 0.56
USP9XQ93008 OR7E47P-201ENST00000546390 1422 ntBASIC18.53■□□□□ 0.56
USP9XQ93008 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.53■□□□□ 0.56
USP9XQ93008 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP9XQ93008 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.52■□□□□ 0.56
USP9XQ93008 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
USP9XQ93008 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP9XQ93008 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.52■□□□□ 0.56
USP9XQ93008 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.52■□□□□ 0.56
USP9XQ93008 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.52■□□□□ 0.56
USP9XQ93008 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
USP9XQ93008 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP9XQ93008 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.52■□□□□ 0.56
USP9XQ93008 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP9XQ93008 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
USP9XQ93008 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP9XQ93008 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.52■□□□□ 0.56
USP9XQ93008 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP9XQ93008 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP9XQ93008 AC092368.3-202ENST00000574180 1591 ntBASIC18.52■□□□□ 0.56
USP9XQ93008 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.52■□□□□ 0.56
USP9XQ93008 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP9XQ93008 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.52■□□□□ 0.56
USP9XQ93008 AC243732.1-201ENST00000612648 864 ntBASIC18.52■□□□□ 0.56
USP9XQ93008 AL589743.5-201ENST00000616611 1050 ntBASIC18.52■□□□□ 0.56
USP9XQ93008 AC100791.3-201ENST00000617619 330 ntBASIC18.52■□□□□ 0.56
USP9XQ93008 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.55
USP9XQ93008 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP9XQ93008 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
USP9XQ93008 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.55
USP9XQ93008 ABCB10P4-201ENST00000566803 2184 ntBASIC18.52■□□□□ 0.55
USP9XQ93008 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP9XQ93008 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP9XQ93008 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP9XQ93008 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
USP9XQ93008 AC053503.5-201ENST00000601508 636 ntBASIC18.51■□□□□ 0.55
USP9XQ93008 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP9XQ93008 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
USP9XQ93008 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.51■□□□□ 0.55
USP9XQ93008 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP9XQ93008 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
USP9XQ93008 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.51■□□□□ 0.55
USP9XQ93008 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP9XQ93008 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.51■□□□□ 0.55
USP9XQ93008 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.51■□□□□ 0.55
USP9XQ93008 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.51■□□□□ 0.55
USP9XQ93008 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.51■□□□□ 0.55
USP9XQ93008 PRKY-204ENST00000533551 1019 ntBASIC18.51■□□□□ 0.55
USP9XQ93008 AL049597.2-201ENST00000565575 961 ntBASIC18.51■□□□□ 0.55
USP9XQ93008 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.51■□□□□ 0.55
USP9XQ93008 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP9XQ93008 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
USP9XQ93008 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.51■□□□□ 0.55
USP9XQ93008 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
USP9XQ93008 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.5■□□□□ 0.55
USP9XQ93008 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.5■□□□□ 0.55
USP9XQ93008 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
USP9XQ93008 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
USP9XQ93008 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP9XQ93008 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP9XQ93008 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
USP9XQ93008 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.5■□□□□ 0.55
USP9XQ93008 AC120498.10-201ENST00000621827 505 ntBASIC18.5■□□□□ 0.55
USP9XQ93008 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms