Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RPGRQ92834 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC26.06■■□□□ 1.76
RPGRQ92834 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.06■■□□□ 1.76
RPGRQ92834 RPS2P4-201ENST00000476944 856 ntBASIC26.06■■□□□ 1.76
RPGRQ92834 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC26.06■■□□□ 1.76
RPGRQ92834 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
RPGRQ92834 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RPGRQ92834 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RPGRQ92834 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RPGRQ92834 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC26.05■■□□□ 1.76
RPGRQ92834 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RPGRQ92834 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
RPGRQ92834 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC26.05■■□□□ 1.76
RPGRQ92834 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC26.05■■□□□ 1.76
RPGRQ92834 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC26.05■■□□□ 1.76
RPGRQ92834 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RPGRQ92834 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RPGRQ92834 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RPGRQ92834 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RPGRQ92834 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC26.04■■□□□ 1.76
RPGRQ92834 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC26.04■■□□□ 1.76
RPGRQ92834 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.04■■□□□ 1.76
RPGRQ92834 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RPGRQ92834 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC26.04■■□□□ 1.76
RPGRQ92834 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC26.04■■□□□ 1.76
RPGRQ92834 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RPGRQ92834 AC091799.1-201ENST00000422823 811 ntBASIC26.04■■□□□ 1.76
RPGRQ92834 UNC93B4-201ENST00000505679 747 ntBASIC26.04■■□□□ 1.76
RPGRQ92834 FAM21FP-204ENST00000608637 956 ntBASIC26.04■■□□□ 1.76
RPGRQ92834 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC26.04■■□□□ 1.76
RPGRQ92834 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RPGRQ92834 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
RPGRQ92834 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RPGRQ92834 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
RPGRQ92834 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.03■■□□□ 1.76
RPGRQ92834 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.03■■□□□ 1.76
RPGRQ92834 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RPGRQ92834 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.03■■□□□ 1.76
RPGRQ92834 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RPGRQ92834 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
RPGRQ92834 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC26.03■■□□□ 1.76
RPGRQ92834 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RPGRQ92834 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC26.03■■□□□ 1.76
RPGRQ92834 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
RPGRQ92834 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
RPGRQ92834 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
RPGRQ92834 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RPGRQ92834 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RPGRQ92834 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC26.02■■□□□ 1.76
RPGRQ92834 AL596275.1-201ENST00000423464 877 ntBASIC26.02■■□□□ 1.76
RPGRQ92834 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RPGRQ92834 AC245052.3-201ENST00000450182 901 ntBASIC26.02■■□□□ 1.76
RPGRQ92834 CDV3P1-201ENST00000471403 739 ntBASIC26.02■■□□□ 1.76
RPGRQ92834 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC26.02■■□□□ 1.76
RPGRQ92834 CYP2T3P-201ENST00000601990 817 ntBASIC26.02■■□□□ 1.76
RPGRQ92834 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC26.02■■□□□ 1.76
RPGRQ92834 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
RPGRQ92834 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RPGRQ92834 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
RPGRQ92834 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
RPGRQ92834 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RPGRQ92834 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.01■■□□□ 1.75
RPGRQ92834 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RPGRQ92834 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RPGRQ92834 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RPGRQ92834 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC26.01■■□□□ 1.75
RPGRQ92834 NME6-213ENST00000451657 871 ntTSL 2 BASIC26.01■■□□□ 1.75
RPGRQ92834 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC26.01■■□□□ 1.75
RPGRQ92834 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RPGRQ92834 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC26.01■■□□□ 1.75
RPGRQ92834 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.01■■□□□ 1.75
RPGRQ92834 AC093323.1-202ENST00000635031 2045 ntBASIC26.01■■□□□ 1.75
RPGRQ92834 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26■■□□□ 1.75
RPGRQ92834 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
RPGRQ92834 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
RPGRQ92834 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
RPGRQ92834 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RPGRQ92834 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RPGRQ92834 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC26■■□□□ 1.75
RPGRQ92834 AC100791.3-201ENST00000617619 330 ntBASIC26■■□□□ 1.75
RPGRQ92834 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
RPGRQ92834 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
RPGRQ92834 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RPGRQ92834 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26■■□□□ 1.75
RPGRQ92834 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC25.99■■□□□ 1.75
RPGRQ92834 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC25.99■■□□□ 1.75
RPGRQ92834 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RPGRQ92834 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RPGRQ92834 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RPGRQ92834 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC25.99■■□□□ 1.75
RPGRQ92834 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RPGRQ92834 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RPGRQ92834 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC25.99■■□□□ 1.75
RPGRQ92834 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC25.99■■□□□ 1.75
RPGRQ92834 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.99■■□□□ 1.75
RPGRQ92834 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RPGRQ92834 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
RPGRQ92834 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC25.99■■□□□ 1.75
RPGRQ92834 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.98■■□□□ 1.75
RPGRQ92834 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms