Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD3L1Q8WWY6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD3L1Q8WWY6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD3L1Q8WWY6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.49■□□□□ 0.23
MBD3L1Q8WWY6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD3L1Q8WWY6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
MBD3L1Q8WWY6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD3L1Q8WWY6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD3L1Q8WWY6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MBD3L1Q8WWY6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.49■□□□□ 0.23
MBD3L1Q8WWY6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
MBD3L1Q8WWY6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MBD3L1Q8WWY6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.49■□□□□ 0.23
MBD3L1Q8WWY6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD3L1Q8WWY6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L1Q8WWY6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L1Q8WWY6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
MBD3L1Q8WWY6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L1Q8WWY6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L1Q8WWY6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L1Q8WWY6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L1Q8WWY6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MBD3L1Q8WWY6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L1Q8WWY6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MBD3L1Q8WWY6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.48■□□□□ 0.23
MBD3L1Q8WWY6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L1Q8WWY6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L1Q8WWY6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L1Q8WWY6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.48■□□□□ 0.23
MBD3L1Q8WWY6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L1Q8WWY6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L1Q8WWY6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
MBD3L1Q8WWY6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.48■□□□□ 0.23
MBD3L1Q8WWY6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L1Q8WWY6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L1Q8WWY6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
MBD3L1Q8WWY6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.47■□□□□ 0.23
MBD3L1Q8WWY6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L1Q8WWY6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L1Q8WWY6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
MBD3L1Q8WWY6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L1Q8WWY6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L1Q8WWY6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.47■□□□□ 0.23
MBD3L1Q8WWY6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L1Q8WWY6 AC139795.1-202ENST00000500444 432 ntBASIC16.47■□□□□ 0.23
MBD3L1Q8WWY6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L1Q8WWY6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.47■□□□□ 0.23
MBD3L1Q8WWY6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.47■□□□□ 0.23
MBD3L1Q8WWY6 AC007225.1-201ENST00000566331 1836 ntBASIC16.47■□□□□ 0.23
MBD3L1Q8WWY6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L1Q8WWY6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MBD3L1Q8WWY6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
MBD3L1Q8WWY6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
MBD3L1Q8WWY6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.46■□□□□ 0.23
MBD3L1Q8WWY6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
MBD3L1Q8WWY6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.46■□□□□ 0.23
MBD3L1Q8WWY6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MBD3L1Q8WWY6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
MBD3L1Q8WWY6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
MBD3L1Q8WWY6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MBD3L1Q8WWY6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.46■□□□□ 0.23
MBD3L1Q8WWY6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MBD3L1Q8WWY6 AL499627.2-201ENST00000606283 725 ntBASIC16.46■□□□□ 0.23
MBD3L1Q8WWY6 MIR6722-201ENST00000617286 78 ntBASIC16.46■□□□□ 0.23
MBD3L1Q8WWY6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.46■□□□□ 0.23
MBD3L1Q8WWY6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.46■□□□□ 0.23
MBD3L1Q8WWY6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.46■□□□□ 0.23
MBD3L1Q8WWY6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
MBD3L1Q8WWY6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
MBD3L1Q8WWY6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
MBD3L1Q8WWY6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.46■□□□□ 0.22
MBD3L1Q8WWY6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 AC112907.3-201ENST00000577781 2400 ntBASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L1Q8WWY6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L1Q8WWY6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms