Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC32.59■■■□□ 2.81
CCNB3Q8WWL7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CCNB3Q8WWL7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CCNB3Q8WWL7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC32.59■■■□□ 2.81
CCNB3Q8WWL7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC32.59■■■□□ 2.81
CCNB3Q8WWL7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
CCNB3Q8WWL7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC32.58■■■□□ 2.81
CCNB3Q8WWL7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC32.58■■■□□ 2.81
CCNB3Q8WWL7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC32.58■■■□□ 2.81
CCNB3Q8WWL7 AC008694.1-202ENST00000636953 945 ntBASIC32.58■■■□□ 2.81
CCNB3Q8WWL7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC32.58■■■□□ 2.81
CCNB3Q8WWL7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CCNB3Q8WWL7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
CCNB3Q8WWL7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC32.58■■■□□ 2.81
CCNB3Q8WWL7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC32.58■■■□□ 2.81
CCNB3Q8WWL7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC32.58■■■□□ 2.81
CCNB3Q8WWL7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
CCNB3Q8WWL7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC32.58■■■□□ 2.81
CCNB3Q8WWL7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
CCNB3Q8WWL7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC32.57■■■□□ 2.8
CCNB3Q8WWL7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC32.57■■■□□ 2.8
CCNB3Q8WWL7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC32.57■■■□□ 2.8
CCNB3Q8WWL7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
CCNB3Q8WWL7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC32.57■■■□□ 2.8
CCNB3Q8WWL7 RNA5SP413-201ENST00000516373 109 ntBASIC32.57■■■□□ 2.8
CCNB3Q8WWL7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
CCNB3Q8WWL7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CCNB3Q8WWL7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CCNB3Q8WWL7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CCNB3Q8WWL7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CCNB3Q8WWL7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CCNB3Q8WWL7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CCNB3Q8WWL7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC32.56■■■□□ 2.8
CCNB3Q8WWL7 AC083880.1-201ENST00000608266 535 ntBASIC32.56■■■□□ 2.8
CCNB3Q8WWL7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC32.56■■■□□ 2.8
CCNB3Q8WWL7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
CCNB3Q8WWL7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC32.55■■■□□ 2.8
CCNB3Q8WWL7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC32.55■■■□□ 2.8
CCNB3Q8WWL7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC32.55■■■□□ 2.8
CCNB3Q8WWL7 POU5F1P3-201ENST00000428824 1078 ntBASIC32.55■■■□□ 2.8
CCNB3Q8WWL7 AL162412.1-201ENST00000567129 965 ntBASIC32.55■■■□□ 2.8
CCNB3Q8WWL7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC32.55■■■□□ 2.8
CCNB3Q8WWL7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC32.55■■■□□ 2.8
CCNB3Q8WWL7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC32.54■■■□□ 2.8
CCNB3Q8WWL7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC32.54■■■□□ 2.8
CCNB3Q8WWL7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC32.54■■■□□ 2.8
CCNB3Q8WWL7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CCNB3Q8WWL7 BX276092.2-201ENST00000417668 665 ntBASIC32.54■■■□□ 2.8
CCNB3Q8WWL7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CCNB3Q8WWL7 MYC-209ENST00000641252 345 ntBASIC32.54■■■□□ 2.8
CCNB3Q8WWL7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CCNB3Q8WWL7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CCNB3Q8WWL7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC32.53■■■□□ 2.8
CCNB3Q8WWL7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC32.53■■■□□ 2.8
CCNB3Q8WWL7 AC243732.1-201ENST00000612648 864 ntBASIC32.53■■■□□ 2.8
CCNB3Q8WWL7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
CCNB3Q8WWL7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CCNB3Q8WWL7 AC061975.6-201ENST00000579045 1553 ntBASIC32.53■■■□□ 2.8
CCNB3Q8WWL7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC32.52■■■□□ 2.8
CCNB3Q8WWL7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC32.52■■■□□ 2.8
CCNB3Q8WWL7 AC003102.1-202ENST00000563394 1796 ntBASIC32.52■■■□□ 2.8
CCNB3Q8WWL7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CCNB3Q8WWL7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CCNB3Q8WWL7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC32.52■■■□□ 2.8
CCNB3Q8WWL7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CCNB3Q8WWL7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CCNB3Q8WWL7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CCNB3Q8WWL7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CCNB3Q8WWL7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
CCNB3Q8WWL7 AL117328.2-201ENST00000624617 1940 ntBASIC32.51■■■□□ 2.8
CCNB3Q8WWL7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC32.51■■■□□ 2.79
CCNB3Q8WWL7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
CCNB3Q8WWL7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
CCNB3Q8WWL7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
CCNB3Q8WWL7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CCNB3Q8WWL7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
CCNB3Q8WWL7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
CCNB3Q8WWL7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC32.5■■■□□ 2.79
CCNB3Q8WWL7 AC008687.6-201ENST00000596318 630 ntBASIC32.5■■■□□ 2.79
CCNB3Q8WWL7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC32.5■■■□□ 2.79
CCNB3Q8WWL7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
CCNB3Q8WWL7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CCNB3Q8WWL7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC32.5■■■□□ 2.79
CCNB3Q8WWL7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CCNB3Q8WWL7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CCNB3Q8WWL7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CCNB3Q8WWL7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC32.49■■■□□ 2.79
CCNB3Q8WWL7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC32.49■■■□□ 2.79
CCNB3Q8WWL7 ITM2C-210ENST00000620962 501 ntBASIC32.49■■■□□ 2.79
CCNB3Q8WWL7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CCNB3Q8WWL7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
CCNB3Q8WWL7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC32.48■■■□□ 2.79
CCNB3Q8WWL7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC32.48■■■□□ 2.79
CCNB3Q8WWL7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC32.48■■■□□ 2.79
CCNB3Q8WWL7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC32.48■■■□□ 2.79
CCNB3Q8WWL7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC32.48■■■□□ 2.79
CCNB3Q8WWL7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CCNB3Q8WWL7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CCNB3Q8WWL7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CCNB3Q8WWL7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms