Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.09■■□□□ 1.13
RNF139Q8WU17 AC008175.2-201ENST00000612840 297 ntBASIC22.09■■□□□ 1.13
RNF139Q8WU17 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RNF139Q8WU17 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF139Q8WU17 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF139Q8WU17 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF139Q8WU17 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
RNF139Q8WU17 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF139Q8WU17 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.08■■□□□ 1.13
RNF139Q8WU17 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
RNF139Q8WU17 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.08■■□□□ 1.13
RNF139Q8WU17 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.08■■□□□ 1.13
RNF139Q8WU17 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.08■■□□□ 1.13
RNF139Q8WU17 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.08■■□□□ 1.13
RNF139Q8WU17 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RNF139Q8WU17 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.08■■□□□ 1.13
RNF139Q8WU17 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RNF139Q8WU17 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.08■■□□□ 1.13
RNF139Q8WU17 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.08■■□□□ 1.13
RNF139Q8WU17 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.08■■□□□ 1.13
RNF139Q8WU17 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RNF139Q8WU17 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RNF139Q8WU17 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.08■■□□□ 1.13
RNF139Q8WU17 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.08■■□□□ 1.12
RNF139Q8WU17 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
RNF139Q8WU17 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF139Q8WU17 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RNF139Q8WU17 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF139Q8WU17 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF139Q8WU17 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF139Q8WU17 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RNF139Q8WU17 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.07■■□□□ 1.12
RNF139Q8WU17 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RNF139Q8WU17 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RNF139Q8WU17 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.07■■□□□ 1.12
RNF139Q8WU17 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.07■■□□□ 1.12
RNF139Q8WU17 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.07■■□□□ 1.12
RNF139Q8WU17 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.07■■□□□ 1.12
RNF139Q8WU17 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.07■■□□□ 1.12
RNF139Q8WU17 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RNF139Q8WU17 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
RNF139Q8WU17 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF139Q8WU17 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RNF139Q8WU17 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RNF139Q8WU17 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
RNF139Q8WU17 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
RNF139Q8WU17 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF139Q8WU17 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF139Q8WU17 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RNF139Q8WU17 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.06■■□□□ 1.12
RNF139Q8WU17 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
RNF139Q8WU17 KRT18P20-201ENST00000548986 1279 ntBASIC22.06■■□□□ 1.12
RNF139Q8WU17 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.06■■□□□ 1.12
RNF139Q8WU17 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
RNF139Q8WU17 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RNF139Q8WU17 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.05■■□□□ 1.12
RNF139Q8WU17 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
RNF139Q8WU17 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF139Q8WU17 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RNF139Q8WU17 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.05■■□□□ 1.12
RNF139Q8WU17 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.05■■□□□ 1.12
RNF139Q8WU17 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF139Q8WU17 UBE2DNL-204ENST00000602536 740 ntBASIC22.05■■□□□ 1.12
RNF139Q8WU17 AC120498.10-201ENST00000621827 505 ntBASIC22.05■■□□□ 1.12
RNF139Q8WU17 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.05■■□□□ 1.12
RNF139Q8WU17 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
RNF139Q8WU17 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
RNF139Q8WU17 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF139Q8WU17 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.04■■□□□ 1.12
RNF139Q8WU17 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
RNF139Q8WU17 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF139Q8WU17 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF139Q8WU17 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.04■■□□□ 1.12
RNF139Q8WU17 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF139Q8WU17 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF139Q8WU17 POU5F1P4-201ENST00000413175 1085 ntBASIC22.04■■□□□ 1.12
RNF139Q8WU17 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
RNF139Q8WU17 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.04■■□□□ 1.12
RNF139Q8WU17 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF139Q8WU17 BID-214ENST00000617586 542 ntTSL 5 BASIC22.04■■□□□ 1.12
RNF139Q8WU17 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.04■■□□□ 1.12
RNF139Q8WU17 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF139Q8WU17 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF139Q8WU17 AC244015.2-201ENST00000616358 1861 ntBASIC22.04■■□□□ 1.12
RNF139Q8WU17 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF139Q8WU17 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
RNF139Q8WU17 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.04■■□□□ 1.12
RNF139Q8WU17 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
RNF139Q8WU17 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF139Q8WU17 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.03■■□□□ 1.12
RNF139Q8WU17 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF139Q8WU17 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF139Q8WU17 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.03■■□□□ 1.12
RNF139Q8WU17 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF139Q8WU17 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF139Q8WU17 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.03■■□□□ 1.12
RNF139Q8WU17 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.03■■□□□ 1.12
RNF139Q8WU17 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF139Q8WU17 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF139Q8WU17 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms