Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 FAM21FP-204ENST00000608637 956 ntBASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 TMPOP1-202ENST00000424642 1267 ntBASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 REXO1L12P-201ENST00000622156 912 ntBASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 AC087499.1-201ENST00000418141 1075 ntBASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 CD177P1-201ENST00000606252 935 ntBASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 AL049637.2-201ENST00000641778 930 ntBASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ALMS1Q8TCU4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 AC008175.2-201ENST00000612840 297 ntBASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 KRT18P35-201ENST00000510488 1269 ntBASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 AC004812.2-201ENST00000611079 2094 ntBASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ALMS1Q8TCU4 MTDHP1-201ENST00000605323 784 ntBASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 AC120498.10-201ENST00000621827 505 ntBASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 AC061975.6-201ENST00000579045 1553 ntBASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 AC239809.2-201ENST00000415381 517 ntBASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 KRT17P3-201ENST00000420566 1262 ntBASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 AC243732.1-201ENST00000612648 864 ntBASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.34□□□□□ -0.11
ALMS1Q8TCU4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ALMS1Q8TCU4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
ALMS1Q8TCU4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ALMS1Q8TCU4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ALMS1Q8TCU4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ALMS1Q8TCU4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.33□□□□□ -0.12
ALMS1Q8TCU4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.33□□□□□ -0.12
ALMS1Q8TCU4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms