Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNIP1Q8TAD8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNIP1Q8TAD8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNIP1Q8TAD8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
SNIP1Q8TAD8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNIP1Q8TAD8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNIP1Q8TAD8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.88■□□□□ 0.77
SNIP1Q8TAD8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.88■□□□□ 0.77
SNIP1Q8TAD8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.88■□□□□ 0.77
SNIP1Q8TAD8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNIP1Q8TAD8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SNIP1Q8TAD8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.88■□□□□ 0.77
SNIP1Q8TAD8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNIP1Q8TAD8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.88■□□□□ 0.77
SNIP1Q8TAD8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.88■□□□□ 0.77
SNIP1Q8TAD8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.88■□□□□ 0.77
SNIP1Q8TAD8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.88■□□□□ 0.77
SNIP1Q8TAD8 CYP2T3P-201ENST00000601990 817 ntBASIC19.88■□□□□ 0.77
SNIP1Q8TAD8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.88■□□□□ 0.77
SNIP1Q8TAD8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SNIP1Q8TAD8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SNIP1Q8TAD8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNIP1Q8TAD8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNIP1Q8TAD8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNIP1Q8TAD8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNIP1Q8TAD8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNIP1Q8TAD8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.87■□□□□ 0.77
SNIP1Q8TAD8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNIP1Q8TAD8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.87■□□□□ 0.77
SNIP1Q8TAD8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNIP1Q8TAD8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.87■□□□□ 0.77
SNIP1Q8TAD8 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.87■□□□□ 0.77
SNIP1Q8TAD8 SNORA78-201ENST00000459373 127 ntBASIC19.87■□□□□ 0.77
SNIP1Q8TAD8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNIP1Q8TAD8 C1QBPP2-201ENST00000528754 825 ntBASIC19.87■□□□□ 0.77
SNIP1Q8TAD8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.87■□□□□ 0.77
SNIP1Q8TAD8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.87■□□□□ 0.77
SNIP1Q8TAD8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNIP1Q8TAD8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNIP1Q8TAD8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SNIP1Q8TAD8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SNIP1Q8TAD8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNIP1Q8TAD8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
SNIP1Q8TAD8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNIP1Q8TAD8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNIP1Q8TAD8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNIP1Q8TAD8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.86■□□□□ 0.77
SNIP1Q8TAD8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
SNIP1Q8TAD8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.86■□□□□ 0.77
SNIP1Q8TAD8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.86■□□□□ 0.77
SNIP1Q8TAD8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.86■□□□□ 0.77
SNIP1Q8TAD8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.86■□□□□ 0.77
SNIP1Q8TAD8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SNIP1Q8TAD8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNIP1Q8TAD8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.86■□□□□ 0.77
SNIP1Q8TAD8 Z99916.2-201ENST00000604037 246 ntBASIC19.86■□□□□ 0.77
SNIP1Q8TAD8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNIP1Q8TAD8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNIP1Q8TAD8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNIP1Q8TAD8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNIP1Q8TAD8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNIP1Q8TAD8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
SNIP1Q8TAD8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.85■□□□□ 0.77
SNIP1Q8TAD8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNIP1Q8TAD8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNIP1Q8TAD8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.85■□□□□ 0.77
SNIP1Q8TAD8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNIP1Q8TAD8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.85■□□□□ 0.77
SNIP1Q8TAD8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.85■□□□□ 0.77
SNIP1Q8TAD8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.85■□□□□ 0.77
SNIP1Q8TAD8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.85■□□□□ 0.77
SNIP1Q8TAD8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNIP1Q8TAD8 LINC01960-201ENST00000563759 1884 ntBASIC19.85■□□□□ 0.77
SNIP1Q8TAD8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SNIP1Q8TAD8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.85■□□□□ 0.77
SNIP1Q8TAD8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNIP1Q8TAD8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNIP1Q8TAD8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNIP1Q8TAD8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNIP1Q8TAD8 KRT17P3-201ENST00000420566 1262 ntBASIC19.84■□□□□ 0.77
SNIP1Q8TAD8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNIP1Q8TAD8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
SNIP1Q8TAD8 RN7SL471P-201ENST00000580476 299 ntBASIC19.84■□□□□ 0.77
SNIP1Q8TAD8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.84■□□□□ 0.77
SNIP1Q8TAD8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.84■□□□□ 0.77
SNIP1Q8TAD8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.84■□□□□ 0.77
SNIP1Q8TAD8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SNIP1Q8TAD8 ABCB10P4-201ENST00000566803 2184 ntBASIC19.84■□□□□ 0.77
SNIP1Q8TAD8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNIP1Q8TAD8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNIP1Q8TAD8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SNIP1Q8TAD8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SNIP1Q8TAD8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SNIP1Q8TAD8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNIP1Q8TAD8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
SNIP1Q8TAD8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SNIP1Q8TAD8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNIP1Q8TAD8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNIP1Q8TAD8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNIP1Q8TAD8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms