Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH19Q8TAB3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PCDH19Q8TAB3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH19Q8TAB3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH19Q8TAB3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
PCDH19Q8TAB3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH19Q8TAB3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PCDH19Q8TAB3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH19Q8TAB3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDH19Q8TAB3 AC079140.4-201ENST00000507448 529 ntBASIC21.72■■□□□ 1.07
PCDH19Q8TAB3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDH19Q8TAB3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH19Q8TAB3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH19Q8TAB3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH19Q8TAB3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PCDH19Q8TAB3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH19Q8TAB3 LINC02228-203ENST00000641970 1355 ntBASIC21.72■■□□□ 1.07
PCDH19Q8TAB3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH19Q8TAB3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH19Q8TAB3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PCDH19Q8TAB3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH19Q8TAB3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PCDH19Q8TAB3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.71■■□□□ 1.07
PCDH19Q8TAB3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH19Q8TAB3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH19Q8TAB3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH19Q8TAB3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.71■■□□□ 1.07
PCDH19Q8TAB3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDH19Q8TAB3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDH19Q8TAB3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH19Q8TAB3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH19Q8TAB3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH19Q8TAB3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH19Q8TAB3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH19Q8TAB3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDH19Q8TAB3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDH19Q8TAB3 AC123595.1-201ENST00000440769 1046 ntBASIC21.7■■□□□ 1.06
PCDH19Q8TAB3 YBX1P1-201ENST00000445822 960 ntBASIC21.7■■□□□ 1.06
PCDH19Q8TAB3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDH19Q8TAB3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDH19Q8TAB3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDH19Q8TAB3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH19Q8TAB3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH19Q8TAB3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH19Q8TAB3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH19Q8TAB3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.69■■□□□ 1.06
PCDH19Q8TAB3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH19Q8TAB3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH19Q8TAB3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH19Q8TAB3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH19Q8TAB3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH19Q8TAB3 KRT87P-202ENST00000534226 1464 ntBASIC21.69■■□□□ 1.06
PCDH19Q8TAB3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH19Q8TAB3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PCDH19Q8TAB3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH19Q8TAB3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH19Q8TAB3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH19Q8TAB3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PCDH19Q8TAB3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDH19Q8TAB3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDH19Q8TAB3 TERF1P2-201ENST00000583350 1212 ntBASIC21.68■■□□□ 1.06
PCDH19Q8TAB3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH19Q8TAB3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH19Q8TAB3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH19Q8TAB3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PCDH19Q8TAB3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PCDH19Q8TAB3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDH19Q8TAB3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH19Q8TAB3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH19Q8TAB3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PCDH19Q8TAB3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
PCDH19Q8TAB3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH19Q8TAB3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.67■■□□□ 1.06
PCDH19Q8TAB3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDH19Q8TAB3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH19Q8TAB3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH19Q8TAB3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH19Q8TAB3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH19Q8TAB3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDH19Q8TAB3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH19Q8TAB3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH19Q8TAB3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PCDH19Q8TAB3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH19Q8TAB3 AC061975.6-201ENST00000579045 1553 ntBASIC21.66■■□□□ 1.06
PCDH19Q8TAB3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH19Q8TAB3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDH19Q8TAB3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDH19Q8TAB3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PCDH19Q8TAB3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PCDH19Q8TAB3 AC034268.1-201ENST00000441047 882 ntBASIC21.66■■□□□ 1.06
PCDH19Q8TAB3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH19Q8TAB3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH19Q8TAB3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH19Q8TAB3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDH19Q8TAB3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH19Q8TAB3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PCDH19Q8TAB3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH19Q8TAB3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH19Q8TAB3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
PCDH19Q8TAB3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms