Protein–RNA interactions for Protein: Q8NHY6

ZFP28, Zinc finger protein 28 homolog, humanhuman

Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP28Q8NHY6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
ZFP28Q8NHY6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.2■□□□□ 0.82
ZFP28Q8NHY6 AC104564.3-201ENST00000582367 638 ntBASIC20.2■□□□□ 0.82
ZFP28Q8NHY6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.2■□□□□ 0.82
ZFP28Q8NHY6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZFP28Q8NHY6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZFP28Q8NHY6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZFP28Q8NHY6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.19■□□□□ 0.82
ZFP28Q8NHY6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.19■□□□□ 0.82
ZFP28Q8NHY6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFP28Q8NHY6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.19■□□□□ 0.82
ZFP28Q8NHY6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFP28Q8NHY6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ZFP28Q8NHY6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFP28Q8NHY6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.19■□□□□ 0.82
ZFP28Q8NHY6 PBX2P1-201ENST00000493219 1291 ntBASIC20.19■□□□□ 0.82
ZFP28Q8NHY6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.19■□□□□ 0.82
ZFP28Q8NHY6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFP28Q8NHY6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFP28Q8NHY6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFP28Q8NHY6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFP28Q8NHY6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFP28Q8NHY6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.18■□□□□ 0.82
ZFP28Q8NHY6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFP28Q8NHY6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZFP28Q8NHY6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.18■□□□□ 0.82
ZFP28Q8NHY6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.18■□□□□ 0.82
ZFP28Q8NHY6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFP28Q8NHY6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.18■□□□□ 0.82
ZFP28Q8NHY6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.18■□□□□ 0.82
ZFP28Q8NHY6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.18■□□□□ 0.82
ZFP28Q8NHY6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFP28Q8NHY6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFP28Q8NHY6 AP004607.7-201ENST00000527152 1677 ntBASIC20.18■□□□□ 0.82
ZFP28Q8NHY6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFP28Q8NHY6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.18■□□□□ 0.82
ZFP28Q8NHY6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZFP28Q8NHY6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFP28Q8NHY6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ZFP28Q8NHY6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
ZFP28Q8NHY6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.17■□□□□ 0.82
ZFP28Q8NHY6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.17■□□□□ 0.82
ZFP28Q8NHY6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZFP28Q8NHY6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.17■□□□□ 0.82
ZFP28Q8NHY6 IGHV3-19-201ENST00000521488 291 ntBASIC20.17■□□□□ 0.82
ZFP28Q8NHY6 AC027682.1-201ENST00000562846 899 ntBASIC20.17■□□□□ 0.82
ZFP28Q8NHY6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.17■□□□□ 0.82
ZFP28Q8NHY6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.17■□□□□ 0.82
ZFP28Q8NHY6 AC106739.1-201ENST00000617035 715 ntBASIC20.17■□□□□ 0.82
ZFP28Q8NHY6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZFP28Q8NHY6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.17■□□□□ 0.82
ZFP28Q8NHY6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZFP28Q8NHY6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ZFP28Q8NHY6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZFP28Q8NHY6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZFP28Q8NHY6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ZFP28Q8NHY6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.17■□□□□ 0.82
ZFP28Q8NHY6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZFP28Q8NHY6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 LINC01006-201ENST00000333319 2292 ntBASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.16■□□□□ 0.82
ZFP28Q8NHY6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.15■□□□□ 0.82
ZFP28Q8NHY6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFP28Q8NHY6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFP28Q8NHY6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFP28Q8NHY6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.15■□□□□ 0.82
ZFP28Q8NHY6 EDA-201ENST00000338901 1233 ntBASIC20.15■□□□□ 0.82
ZFP28Q8NHY6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.15■□□□□ 0.82
ZFP28Q8NHY6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ZFP28Q8NHY6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.15■□□□□ 0.82
ZFP28Q8NHY6 AC008764.7-201ENST00000593779 1081 ntBASIC20.15■□□□□ 0.82
ZFP28Q8NHY6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.15■□□□□ 0.82
ZFP28Q8NHY6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZFP28Q8NHY6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.15■□□□□ 0.82
ZFP28Q8NHY6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.15■□□□□ 0.82
ZFP28Q8NHY6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.15■□□□□ 0.82
ZFP28Q8NHY6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZFP28Q8NHY6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFP28Q8NHY6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFP28Q8NHY6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms