Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD2Q8NHY2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.74■□□□□ 0.91
RFWD2Q8NHY2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.74■□□□□ 0.91
RFWD2Q8NHY2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RFWD2Q8NHY2 PLK5-205ENST00000642079 1969 ntBASIC20.74■□□□□ 0.91
RFWD2Q8NHY2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFWD2Q8NHY2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFWD2Q8NHY2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFWD2Q8NHY2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFWD2Q8NHY2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RFWD2Q8NHY2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RFWD2Q8NHY2 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.74■□□□□ 0.91
RFWD2Q8NHY2 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.74■□□□□ 0.91
RFWD2Q8NHY2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFWD2Q8NHY2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFWD2Q8NHY2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFWD2Q8NHY2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFWD2Q8NHY2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.73■□□□□ 0.91
RFWD2Q8NHY2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFWD2Q8NHY2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RFWD2Q8NHY2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.73■□□□□ 0.91
RFWD2Q8NHY2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFWD2Q8NHY2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFWD2Q8NHY2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFWD2Q8NHY2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFWD2Q8NHY2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
RFWD2Q8NHY2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.73■□□□□ 0.91
RFWD2Q8NHY2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.73■□□□□ 0.91
RFWD2Q8NHY2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFWD2Q8NHY2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFWD2Q8NHY2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
RFWD2Q8NHY2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFWD2Q8NHY2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.73■□□□□ 0.91
RFWD2Q8NHY2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFWD2Q8NHY2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
RFWD2Q8NHY2 AC003102.1-202ENST00000563394 1796 ntBASIC20.72■□□□□ 0.91
RFWD2Q8NHY2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFWD2Q8NHY2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.72■□□□□ 0.91
RFWD2Q8NHY2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFWD2Q8NHY2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFWD2Q8NHY2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
RFWD2Q8NHY2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFWD2Q8NHY2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFWD2Q8NHY2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.72■□□□□ 0.91
RFWD2Q8NHY2 AC010997.5-201ENST00000609182 354 ntBASIC20.72■□□□□ 0.91
RFWD2Q8NHY2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFWD2Q8NHY2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFWD2Q8NHY2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.72■□□□□ 0.91
RFWD2Q8NHY2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.72■□□□□ 0.91
RFWD2Q8NHY2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFWD2Q8NHY2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
RFWD2Q8NHY2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD2Q8NHY2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.91
RFWD2Q8NHY2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms