Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
ZNF248Q8NDW4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF248Q8NDW4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF248Q8NDW4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.08■□□□□ 0.81
ZNF248Q8NDW4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.08■□□□□ 0.81
ZNF248Q8NDW4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF248Q8NDW4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.08■□□□□ 0.81
ZNF248Q8NDW4 AC120498.10-201ENST00000621827 505 ntBASIC20.08■□□□□ 0.81
ZNF248Q8NDW4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZNF248Q8NDW4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ZNF248Q8NDW4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
ZNF248Q8NDW4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.08■□□□□ 0.8
ZNF248Q8NDW4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 C9orf163-202ENST00000624034 2573 ntBASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 EEF1DP3-203ENST00000566025 782 ntBASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 AC053503.5-201ENST00000601508 636 ntBASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 AC133561.1-201ENST00000568600 2415 ntBASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ZNF248Q8NDW4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ZNF248Q8NDW4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
ZNF248Q8NDW4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
ZNF248Q8NDW4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF248Q8NDW4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF248Q8NDW4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF248Q8NDW4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF248Q8NDW4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF248Q8NDW4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF248Q8NDW4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
ZNF248Q8NDW4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF248Q8NDW4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.06■□□□□ 0.8
ZNF248Q8NDW4 AC079089.2-201ENST00000531211 1277 ntBASIC20.06■□□□□ 0.8
ZNF248Q8NDW4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF248Q8NDW4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ZNF248Q8NDW4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF248Q8NDW4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
ZNF248Q8NDW4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
ZNF248Q8NDW4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.06■□□□□ 0.8
ZNF248Q8NDW4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF248Q8NDW4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF248Q8NDW4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF248Q8NDW4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ZNF248Q8NDW4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.05■□□□□ 0.8
ZNF248Q8NDW4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.05■□□□□ 0.8
ZNF248Q8NDW4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.05■□□□□ 0.8
ZNF248Q8NDW4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF248Q8NDW4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF248Q8NDW4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF248Q8NDW4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.05■□□□□ 0.8
ZNF248Q8NDW4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.05■□□□□ 0.8
ZNF248Q8NDW4 AC026366.1-201ENST00000488803 879 ntBASIC20.05■□□□□ 0.8
ZNF248Q8NDW4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF248Q8NDW4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF248Q8NDW4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF248Q8NDW4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF248Q8NDW4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.05■□□□□ 0.8
ZNF248Q8NDW4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.04■□□□□ 0.8
ZNF248Q8NDW4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF248Q8NDW4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ZNF248Q8NDW4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF248Q8NDW4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ZNF248Q8NDW4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.04■□□□□ 0.8
ZNF248Q8NDW4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF248Q8NDW4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ZNF248Q8NDW4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.04■□□□□ 0.8
ZNF248Q8NDW4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.04■□□□□ 0.8
ZNF248Q8NDW4 AL034346.1-201ENST00000568244 1277 ntBASIC20.04■□□□□ 0.8
ZNF248Q8NDW4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF248Q8NDW4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.04■□□□□ 0.8
ZNF248Q8NDW4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ZNF248Q8NDW4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF248Q8NDW4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF248Q8NDW4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF248Q8NDW4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF248Q8NDW4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ZNF248Q8NDW4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF248Q8NDW4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF248Q8NDW4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ZNF248Q8NDW4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF248Q8NDW4 AC008550.1-201ENST00000511500 884 ntBASIC20.03■□□□□ 0.8
ZNF248Q8NDW4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.03■□□□□ 0.8
ZNF248Q8NDW4 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms