Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
CFAP43Q8NDM7 AL162412.1-201ENST00000567129 965 ntBASIC33.18■■■□□ 2.9
CFAP43Q8NDM7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC33.18■■■□□ 2.9
CFAP43Q8NDM7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
CFAP43Q8NDM7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
CFAP43Q8NDM7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC33.17■■■□□ 2.9
CFAP43Q8NDM7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
CFAP43Q8NDM7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC33.17■■■□□ 2.9
CFAP43Q8NDM7 UBE2SP1-201ENST00000450587 669 ntBASIC33.17■■■□□ 2.9
CFAP43Q8NDM7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC33.17■■■□□ 2.9
CFAP43Q8NDM7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC33.17■■■□□ 2.9
CFAP43Q8NDM7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
CFAP43Q8NDM7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC33.17■■■□□ 2.9
CFAP43Q8NDM7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
CFAP43Q8NDM7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
CFAP43Q8NDM7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
CFAP43Q8NDM7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
CFAP43Q8NDM7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
CFAP43Q8NDM7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC33.17■■■□□ 2.9
CFAP43Q8NDM7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC33.17■■■□□ 2.9
CFAP43Q8NDM7 MIR4497-201ENST00000583208 89 ntBASIC33.17■■■□□ 2.9
CFAP43Q8NDM7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC33.16■■■□□ 2.9
CFAP43Q8NDM7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
CFAP43Q8NDM7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
CFAP43Q8NDM7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC33.16■■■□□ 2.9
CFAP43Q8NDM7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC33.16■■■□□ 2.9
CFAP43Q8NDM7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
CFAP43Q8NDM7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CFAP43Q8NDM7 AC008403.3-201ENST00000598924 454 ntBASIC33.16■■■□□ 2.9
CFAP43Q8NDM7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC33.15■■■□□ 2.9
CFAP43Q8NDM7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC33.15■■■□□ 2.9
CFAP43Q8NDM7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC33.15■■■□□ 2.9
CFAP43Q8NDM7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
CFAP43Q8NDM7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
CFAP43Q8NDM7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC33.15■■■□□ 2.9
CFAP43Q8NDM7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC33.15■■■□□ 2.9
CFAP43Q8NDM7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC33.15■■■□□ 2.9
CFAP43Q8NDM7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC33.15■■■□□ 2.9
CFAP43Q8NDM7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC33.15■■■□□ 2.9
CFAP43Q8NDM7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
CFAP43Q8NDM7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
CFAP43Q8NDM7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
CFAP43Q8NDM7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CFAP43Q8NDM7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC33.14■■■□□ 2.9
CFAP43Q8NDM7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
CFAP43Q8NDM7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC33.14■■■□□ 2.9
CFAP43Q8NDM7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC33.14■■■□□ 2.9
CFAP43Q8NDM7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC33.14■■■□□ 2.9
CFAP43Q8NDM7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CFAP43Q8NDM7 FAM99A-202ENST00000538190 1989 ntBASIC33.14■■■□□ 2.9
CFAP43Q8NDM7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CFAP43Q8NDM7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
CFAP43Q8NDM7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC33.14■■■□□ 2.9
CFAP43Q8NDM7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC33.14■■■□□ 2.9
CFAP43Q8NDM7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.89
CFAP43Q8NDM7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
CFAP43Q8NDM7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC33.13■■■□□ 2.89
CFAP43Q8NDM7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC33.13■■■□□ 2.89
CFAP43Q8NDM7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC33.13■■■□□ 2.89
CFAP43Q8NDM7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC33.13■■■□□ 2.89
CFAP43Q8NDM7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC33.13■■■□□ 2.89
CFAP43Q8NDM7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC33.13■■■□□ 2.89
CFAP43Q8NDM7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC33.13■■■□□ 2.89
CFAP43Q8NDM7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
CFAP43Q8NDM7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
CFAP43Q8NDM7 ECEL1P3-201ENST00000427961 737 ntBASIC33.13■■■□□ 2.89
CFAP43Q8NDM7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC33.13■■■□□ 2.89
CFAP43Q8NDM7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
CFAP43Q8NDM7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC33.13■■■□□ 2.89
CFAP43Q8NDM7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
CFAP43Q8NDM7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC33.13■■■□□ 2.89
CFAP43Q8NDM7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC33.13■■■□□ 2.89
CFAP43Q8NDM7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC33.12■■■□□ 2.89
CFAP43Q8NDM7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC33.12■■■□□ 2.89
CFAP43Q8NDM7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC33.12■■■□□ 2.89
CFAP43Q8NDM7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
CFAP43Q8NDM7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
CFAP43Q8NDM7 MIR1224-201ENST00000408193 85 ntBASIC33.12■■■□□ 2.89
CFAP43Q8NDM7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC33.12■■■□□ 2.89
CFAP43Q8NDM7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
CFAP43Q8NDM7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
CFAP43Q8NDM7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC33.12■■■□□ 2.89
CFAP43Q8NDM7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
CFAP43Q8NDM7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
CFAP43Q8NDM7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC33.11■■■□□ 2.89
CFAP43Q8NDM7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
CFAP43Q8NDM7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CFAP43Q8NDM7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC33.11■■■□□ 2.89
CFAP43Q8NDM7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
CFAP43Q8NDM7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC33.11■■■□□ 2.89
CFAP43Q8NDM7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC33.11■■■□□ 2.89
CFAP43Q8NDM7 AC010331.1-201ENST00000611423 582 ntBASIC33.11■■■□□ 2.89
CFAP43Q8NDM7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CFAP43Q8NDM7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC33.11■■■□□ 2.89
CFAP43Q8NDM7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC33.11■■■□□ 2.89
CFAP43Q8NDM7 SERPINH1P1-201ENST00000419794 1249 ntBASIC33.1■■■□□ 2.89
CFAP43Q8NDM7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC33.1■■■□□ 2.89
CFAP43Q8NDM7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC33.1■■■□□ 2.89
CFAP43Q8NDM7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CFAP43Q8NDM7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms