Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
LINC00116Q8NCU8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC26.9■■□□□ 1.9
LINC00116Q8NCU8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
LINC00116Q8NCU8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
LINC00116Q8NCU8 AC003102.1-202ENST00000563394 1796 ntBASIC26.89■■□□□ 1.9
LINC00116Q8NCU8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
LINC00116Q8NCU8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
LINC00116Q8NCU8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
LINC00116Q8NCU8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC26.89■■□□□ 1.9
LINC00116Q8NCU8 C1QBPP2-201ENST00000528754 825 ntBASIC26.89■■□□□ 1.9
LINC00116Q8NCU8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC26.89■■□□□ 1.9
LINC00116Q8NCU8 Z99916.2-201ENST00000604037 246 ntBASIC26.89■■□□□ 1.9
LINC00116Q8NCU8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
LINC00116Q8NCU8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
LINC00116Q8NCU8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.89■■□□□ 1.89
LINC00116Q8NCU8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC26.88■■□□□ 1.89
LINC00116Q8NCU8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
LINC00116Q8NCU8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
LINC00116Q8NCU8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
LINC00116Q8NCU8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
LINC00116Q8NCU8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
LINC00116Q8NCU8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC26.88■■□□□ 1.89
LINC00116Q8NCU8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC26.88■■□□□ 1.89
LINC00116Q8NCU8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC26.88■■□□□ 1.89
LINC00116Q8NCU8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC26.88■■□□□ 1.89
LINC00116Q8NCU8 MIR4497-201ENST00000583208 89 ntBASIC26.88■■□□□ 1.89
LINC00116Q8NCU8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC26.88■■□□□ 1.89
LINC00116Q8NCU8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC26.88■■□□□ 1.89
LINC00116Q8NCU8 AC100791.3-201ENST00000617619 330 ntBASIC26.88■■□□□ 1.89
LINC00116Q8NCU8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC26.88■■□□□ 1.89
LINC00116Q8NCU8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
LINC00116Q8NCU8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.87■■□□□ 1.89
LINC00116Q8NCU8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LINC00116Q8NCU8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.87■■□□□ 1.89
LINC00116Q8NCU8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC26.87■■□□□ 1.89
LINC00116Q8NCU8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
LINC00116Q8NCU8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LINC00116Q8NCU8 ECEL1P3-201ENST00000427961 737 ntBASIC26.87■■□□□ 1.89
LINC00116Q8NCU8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
LINC00116Q8NCU8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
LINC00116Q8NCU8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
LINC00116Q8NCU8 PNMA6B-201ENST00000538162 1200 ntBASIC26.87■■□□□ 1.89
LINC00116Q8NCU8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.87■■□□□ 1.89
LINC00116Q8NCU8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LINC00116Q8NCU8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
LINC00116Q8NCU8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LINC00116Q8NCU8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.86■■□□□ 1.89
LINC00116Q8NCU8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.86■■□□□ 1.89
LINC00116Q8NCU8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
LINC00116Q8NCU8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
LINC00116Q8NCU8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
LINC00116Q8NCU8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC26.86■■□□□ 1.89
LINC00116Q8NCU8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
LINC00116Q8NCU8 FAM197Y4-202ENST00000622692 608 ntBASIC26.86■■□□□ 1.89
LINC00116Q8NCU8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
LINC00116Q8NCU8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
LINC00116Q8NCU8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC26.86■■□□□ 1.89
LINC00116Q8NCU8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
LINC00116Q8NCU8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
LINC00116Q8NCU8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC26.85■■□□□ 1.89
LINC00116Q8NCU8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
LINC00116Q8NCU8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.85■■□□□ 1.89
LINC00116Q8NCU8 MIR718-201ENST00000390190 70 ntBASIC26.85■■□□□ 1.89
LINC00116Q8NCU8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC26.85■■□□□ 1.89
LINC00116Q8NCU8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC26.85■■□□□ 1.89
LINC00116Q8NCU8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC26.85■■□□□ 1.89
LINC00116Q8NCU8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC26.85■■□□□ 1.89
LINC00116Q8NCU8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
LINC00116Q8NCU8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
LINC00116Q8NCU8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC26.85■■□□□ 1.89
LINC00116Q8NCU8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
LINC00116Q8NCU8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
LINC00116Q8NCU8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
LINC00116Q8NCU8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LINC00116Q8NCU8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
LINC00116Q8NCU8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LINC00116Q8NCU8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC26.84■■□□□ 1.89
LINC00116Q8NCU8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC26.84■■□□□ 1.89
LINC00116Q8NCU8 RN7SL471P-201ENST00000580476 299 ntBASIC26.84■■□□□ 1.89
LINC00116Q8NCU8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.84■■□□□ 1.89
LINC00116Q8NCU8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
LINC00116Q8NCU8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC26.84■■□□□ 1.89
LINC00116Q8NCU8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LINC00116Q8NCU8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LINC00116Q8NCU8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
LINC00116Q8NCU8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
LINC00116Q8NCU8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
LINC00116Q8NCU8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26.83■■□□□ 1.89
LINC00116Q8NCU8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC26.83■■□□□ 1.89
LINC00116Q8NCU8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC26.83■■□□□ 1.89
LINC00116Q8NCU8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC26.83■■□□□ 1.89
LINC00116Q8NCU8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
LINC00116Q8NCU8 AC073912.3-201ENST00000624414 853 ntBASIC26.83■■□□□ 1.89
LINC00116Q8NCU8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
LINC00116Q8NCU8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.88
LINC00116Q8NCU8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC26.83■■□□□ 1.88
LINC00116Q8NCU8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC26.83■■□□□ 1.88
LINC00116Q8NCU8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.88
LINC00116Q8NCU8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
LINC00116Q8NCU8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.82■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms