Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMRP1Q8NCR6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMRP1Q8NCR6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
SMRP1Q8NCR6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMRP1Q8NCR6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMRP1Q8NCR6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.93■■□□□ 1.1
SMRP1Q8NCR6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMRP1Q8NCR6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.93■■□□□ 1.1
SMRP1Q8NCR6 AC091799.1-201ENST00000422823 811 ntBASIC21.93■■□□□ 1.1
SMRP1Q8NCR6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.93■■□□□ 1.1
SMRP1Q8NCR6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
SMRP1Q8NCR6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMRP1Q8NCR6 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.93■■□□□ 1.1
SMRP1Q8NCR6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.93■■□□□ 1.1
SMRP1Q8NCR6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMRP1Q8NCR6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SMRP1Q8NCR6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMRP1Q8NCR6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMRP1Q8NCR6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMRP1Q8NCR6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.92■■□□□ 1.1
SMRP1Q8NCR6 BX088651.1-201ENST00000540551 451 ntBASIC21.92■■□□□ 1.1
SMRP1Q8NCR6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.92■■□□□ 1.1
SMRP1Q8NCR6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
SMRP1Q8NCR6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMRP1Q8NCR6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.92■■□□□ 1.1
SMRP1Q8NCR6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMRP1Q8NCR6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.91■■□□□ 1.1
SMRP1Q8NCR6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
SMRP1Q8NCR6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMRP1Q8NCR6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMRP1Q8NCR6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMRP1Q8NCR6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMRP1Q8NCR6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SMRP1Q8NCR6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMRP1Q8NCR6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.9■■□□□ 1.1
SMRP1Q8NCR6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMRP1Q8NCR6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMRP1Q8NCR6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
SMRP1Q8NCR6 MCRIP2P1-201ENST00000394346 511 ntBASIC21.9■■□□□ 1.1
SMRP1Q8NCR6 CDV3P1-201ENST00000471403 739 ntBASIC21.9■■□□□ 1.1
SMRP1Q8NCR6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMRP1Q8NCR6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMRP1Q8NCR6 KRT18P21-201ENST00000515767 1272 ntBASIC21.9■■□□□ 1.1
SMRP1Q8NCR6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SMRP1Q8NCR6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
SMRP1Q8NCR6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SMRP1Q8NCR6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMRP1Q8NCR6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.9■■□□□ 1.1
SMRP1Q8NCR6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMRP1Q8NCR6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMRP1Q8NCR6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SMRP1Q8NCR6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SMRP1Q8NCR6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.89■■□□□ 1.09
SMRP1Q8NCR6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.89■■□□□ 1.09
SMRP1Q8NCR6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMRP1Q8NCR6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
SMRP1Q8NCR6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMRP1Q8NCR6 AC012618.2-201ENST00000428058 849 ntBASIC21.89■■□□□ 1.09
SMRP1Q8NCR6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.89■■□□□ 1.09
SMRP1Q8NCR6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.89■■□□□ 1.09
SMRP1Q8NCR6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.89■■□□□ 1.09
SMRP1Q8NCR6 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.89■■□□□ 1.09
SMRP1Q8NCR6 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.89■■□□□ 1.09
SMRP1Q8NCR6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMRP1Q8NCR6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMRP1Q8NCR6 SOX15-203ENST00000570788 1093 ntBASIC21.89■■□□□ 1.09
SMRP1Q8NCR6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMRP1Q8NCR6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMRP1Q8NCR6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
SMRP1Q8NCR6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMRP1Q8NCR6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.89■■□□□ 1.09
SMRP1Q8NCR6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.88■■□□□ 1.09
SMRP1Q8NCR6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.88■■□□□ 1.09
SMRP1Q8NCR6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMRP1Q8NCR6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.88■■□□□ 1.09
SMRP1Q8NCR6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMRP1Q8NCR6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMRP1Q8NCR6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMRP1Q8NCR6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMRP1Q8NCR6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.88■■□□□ 1.09
SMRP1Q8NCR6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMRP1Q8NCR6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.88■■□□□ 1.09
SMRP1Q8NCR6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.88■■□□□ 1.09
SMRP1Q8NCR6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMRP1Q8NCR6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.88■■□□□ 1.09
SMRP1Q8NCR6 AC137767.1-201ENST00000602918 1920 ntBASIC21.88■■□□□ 1.09
SMRP1Q8NCR6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.88■■□□□ 1.09
SMRP1Q8NCR6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMRP1Q8NCR6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.88■■□□□ 1.09
SMRP1Q8NCR6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.87■■□□□ 1.09
SMRP1Q8NCR6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMRP1Q8NCR6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.87■■□□□ 1.09
SMRP1Q8NCR6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMRP1Q8NCR6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMRP1Q8NCR6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SMRP1Q8NCR6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMRP1Q8NCR6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.87■■□□□ 1.09
SMRP1Q8NCR6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.87■■□□□ 1.09
SMRP1Q8NCR6 AC233702.5-201ENST00000584107 538 ntBASIC21.87■■□□□ 1.09
SMRP1Q8NCR6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms