Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TRAM1L1Q8N609 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.84■□□□□ 0.93
TRAM1L1Q8N609 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAM1L1Q8N609 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAM1L1Q8N609 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.84■□□□□ 0.93
TRAM1L1Q8N609 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAM1L1Q8N609 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAM1L1Q8N609 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.84■□□□□ 0.93
TRAM1L1Q8N609 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRAM1L1Q8N609 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAM1L1Q8N609 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRAM1L1Q8N609 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAM1L1Q8N609 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAM1L1Q8N609 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAM1L1Q8N609 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAM1L1Q8N609 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAM1L1Q8N609 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAM1L1Q8N609 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAM1L1Q8N609 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAM1L1Q8N609 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAM1L1Q8N609 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAM1L1Q8N609 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAM1L1Q8N609 AC004911.1-201ENST00000416316 871 ntBASIC20.83■□□□□ 0.93
TRAM1L1Q8N609 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.83■□□□□ 0.93
TRAM1L1Q8N609 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.83■□□□□ 0.93
TRAM1L1Q8N609 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.83■□□□□ 0.93
TRAM1L1Q8N609 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.83■□□□□ 0.93
TRAM1L1Q8N609 BID-214ENST00000617586 542 ntTSL 5 BASIC20.83■□□□□ 0.93
TRAM1L1Q8N609 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.83■□□□□ 0.93
TRAM1L1Q8N609 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.83■□□□□ 0.93
TRAM1L1Q8N609 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
TRAM1L1Q8N609 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAM1L1Q8N609 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.83■□□□□ 0.92
TRAM1L1Q8N609 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
TRAM1L1Q8N609 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.83■□□□□ 0.92
TRAM1L1Q8N609 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAM1L1Q8N609 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.82■□□□□ 0.92
TRAM1L1Q8N609 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.82■□□□□ 0.92
TRAM1L1Q8N609 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAM1L1Q8N609 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAM1L1Q8N609 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAM1L1Q8N609 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAM1L1Q8N609 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.82■□□□□ 0.92
TRAM1L1Q8N609 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.82■□□□□ 0.92
TRAM1L1Q8N609 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAM1L1Q8N609 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAM1L1Q8N609 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAM1L1Q8N609 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.82■□□□□ 0.92
TRAM1L1Q8N609 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TRAM1L1Q8N609 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.81■□□□□ 0.92
TRAM1L1Q8N609 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAM1L1Q8N609 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TRAM1L1Q8N609 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAM1L1Q8N609 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.81■□□□□ 0.92
TRAM1L1Q8N609 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.81■□□□□ 0.92
TRAM1L1Q8N609 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.81■□□□□ 0.92
TRAM1L1Q8N609 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.81■□□□□ 0.92
TRAM1L1Q8N609 MFSD11-216ENST00000590393 1141 ntBASIC20.81■□□□□ 0.92
TRAM1L1Q8N609 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.81■□□□□ 0.92
TRAM1L1Q8N609 AC011767.1-201ENST00000617410 1153 ntBASIC20.81■□□□□ 0.92
TRAM1L1Q8N609 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAM1L1Q8N609 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRAM1L1Q8N609 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAM1L1Q8N609 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAM1L1Q8N609 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAM1L1Q8N609 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAM1L1Q8N609 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAM1L1Q8N609 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.8■□□□□ 0.92
TRAM1L1Q8N609 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAM1L1Q8N609 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.8■□□□□ 0.92
TRAM1L1Q8N609 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAM1L1Q8N609 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TRAM1L1Q8N609 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAM1L1Q8N609 Z98882.1-201ENST00000622160 2253 ntBASIC20.8■□□□□ 0.92
TRAM1L1Q8N609 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TRAM1L1Q8N609 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAM1L1Q8N609 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAM1L1Q8N609 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAM1L1Q8N609 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms