Protein–RNA interactions for Protein: Q8N309

LRRC43, Leucine-rich repeat-containing protein 43, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC43Q8N309 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LRRC43Q8N309 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
LRRC43Q8N309 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LRRC43Q8N309 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LRRC43Q8N309 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
LRRC43Q8N309 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
LRRC43Q8N309 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.69■■□□□ 1.22
LRRC43Q8N309 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
LRRC43Q8N309 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.69■■□□□ 1.22
LRRC43Q8N309 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.69■■□□□ 1.22
LRRC43Q8N309 RARRES2P4-201ENST00000514074 484 ntBASIC22.69■■□□□ 1.22
LRRC43Q8N309 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.69■■□□□ 1.22
LRRC43Q8N309 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.69■■□□□ 1.22
LRRC43Q8N309 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.69■■□□□ 1.22
LRRC43Q8N309 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LRRC43Q8N309 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.69■■□□□ 1.22
LRRC43Q8N309 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.69■■□□□ 1.22
LRRC43Q8N309 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
LRRC43Q8N309 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.69■■□□□ 1.22
LRRC43Q8N309 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
LRRC43Q8N309 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.68■■□□□ 1.22
LRRC43Q8N309 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
LRRC43Q8N309 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LRRC43Q8N309 AC010980.2-201ENST00000587099 1412 ntBASIC22.68■■□□□ 1.22
LRRC43Q8N309 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
LRRC43Q8N309 AC083880.1-201ENST00000608266 535 ntBASIC22.68■■□□□ 1.22
LRRC43Q8N309 MYC-209ENST00000641252 345 ntBASIC22.68■■□□□ 1.22
LRRC43Q8N309 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LRRC43Q8N309 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
LRRC43Q8N309 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.68■■□□□ 1.22
LRRC43Q8N309 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.68■■□□□ 1.22
LRRC43Q8N309 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LRRC43Q8N309 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.67■■□□□ 1.22
LRRC43Q8N309 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LRRC43Q8N309 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
LRRC43Q8N309 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LRRC43Q8N309 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
LRRC43Q8N309 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.67■■□□□ 1.22
LRRC43Q8N309 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.67■■□□□ 1.22
LRRC43Q8N309 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.67■■□□□ 1.22
LRRC43Q8N309 AC003102.1-202ENST00000563394 1796 ntBASIC22.67■■□□□ 1.22
LRRC43Q8N309 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LRRC43Q8N309 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LRRC43Q8N309 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.67■■□□□ 1.22
LRRC43Q8N309 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRRC43Q8N309 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRRC43Q8N309 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRRC43Q8N309 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LRRC43Q8N309 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.66■■□□□ 1.22
LRRC43Q8N309 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRRC43Q8N309 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.66■■□□□ 1.22
LRRC43Q8N309 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRRC43Q8N309 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
LRRC43Q8N309 KRT18P29-201ENST00000397031 1267 ntBASIC22.66■■□□□ 1.22
LRRC43Q8N309 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
LRRC43Q8N309 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRRC43Q8N309 AC097658.1-201ENST00000475555 843 ntBASIC22.66■■□□□ 1.22
LRRC43Q8N309 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
LRRC43Q8N309 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.66■■□□□ 1.22
LRRC43Q8N309 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.66■■□□□ 1.22
LRRC43Q8N309 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.66■■□□□ 1.22
LRRC43Q8N309 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.66■■□□□ 1.22
LRRC43Q8N309 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRRC43Q8N309 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
LRRC43Q8N309 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.66■■□□□ 1.22
LRRC43Q8N309 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRRC43Q8N309 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC43Q8N309 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC43Q8N309 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.65■■□□□ 1.22
LRRC43Q8N309 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.65■■□□□ 1.22
LRRC43Q8N309 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC43Q8N309 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC43Q8N309 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.65■■□□□ 1.22
LRRC43Q8N309 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC43Q8N309 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC43Q8N309 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC43Q8N309 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.65■■□□□ 1.22
LRRC43Q8N309 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.65■■□□□ 1.22
LRRC43Q8N309 AC008687.6-201ENST00000596318 630 ntBASIC22.65■■□□□ 1.22
LRRC43Q8N309 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC43Q8N309 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.65■■□□□ 1.22
LRRC43Q8N309 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC43Q8N309 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC43Q8N309 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.65■■□□□ 1.22
LRRC43Q8N309 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.65■■□□□ 1.22
LRRC43Q8N309 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC43Q8N309 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
LRRC43Q8N309 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
LRRC43Q8N309 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LRRC43Q8N309 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LRRC43Q8N309 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.64■■□□□ 1.21
LRRC43Q8N309 AC091874.3-201ENST00000512672 1195 ntBASIC22.64■■□□□ 1.21
LRRC43Q8N309 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
LRRC43Q8N309 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LRRC43Q8N309 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
LRRC43Q8N309 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LRRC43Q8N309 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.64■■□□□ 1.21
LRRC43Q8N309 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LRRC43Q8N309 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.63■■□□□ 1.21
LRRC43Q8N309 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms