Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC60Q8IWA6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.48■■□□□ 1.35
CCDC60Q8IWA6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC60Q8IWA6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC60Q8IWA6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.48■■□□□ 1.35
CCDC60Q8IWA6 CYP2T1P-201ENST00000432607 1285 ntBASIC23.48■■□□□ 1.35
CCDC60Q8IWA6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC60Q8IWA6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.48■■□□□ 1.35
CCDC60Q8IWA6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.48■■□□□ 1.35
CCDC60Q8IWA6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.48■■□□□ 1.35
CCDC60Q8IWA6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC60Q8IWA6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
CCDC60Q8IWA6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CCDC60Q8IWA6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.47■■□□□ 1.35
CCDC60Q8IWA6 AL355802.2-201ENST00000402069 882 ntBASIC23.47■■□□□ 1.35
CCDC60Q8IWA6 TSPY6P-201ENST00000448518 926 ntBASIC23.47■■□□□ 1.35
CCDC60Q8IWA6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.47■■□□□ 1.35
CCDC60Q8IWA6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.47■■□□□ 1.35
CCDC60Q8IWA6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.47■■□□□ 1.35
CCDC60Q8IWA6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.47■■□□□ 1.35
CCDC60Q8IWA6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
CCDC60Q8IWA6 AC012676.1-201ENST00000574705 1949 ntBASIC23.47■■□□□ 1.35
CCDC60Q8IWA6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
CCDC60Q8IWA6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
CCDC60Q8IWA6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CCDC60Q8IWA6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CCDC60Q8IWA6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
CCDC60Q8IWA6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.46■■□□□ 1.35
CCDC60Q8IWA6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
CCDC60Q8IWA6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
CCDC60Q8IWA6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
CCDC60Q8IWA6 AL117328.2-201ENST00000624617 1940 ntBASIC23.46■■□□□ 1.35
CCDC60Q8IWA6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CCDC60Q8IWA6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
CCDC60Q8IWA6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.45■■□□□ 1.35
CCDC60Q8IWA6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
CCDC60Q8IWA6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
CCDC60Q8IWA6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.45■■□□□ 1.34
CCDC60Q8IWA6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.45■■□□□ 1.34
CCDC60Q8IWA6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CCDC60Q8IWA6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CCDC60Q8IWA6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CCDC60Q8IWA6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
CCDC60Q8IWA6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CCDC60Q8IWA6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CCDC60Q8IWA6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CCDC60Q8IWA6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CCDC60Q8IWA6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CCDC60Q8IWA6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.44■■□□□ 1.34
CCDC60Q8IWA6 AC133552.2-202ENST00000575694 574 ntBASIC23.44■■□□□ 1.34
CCDC60Q8IWA6 AC243732.1-201ENST00000612648 864 ntBASIC23.44■■□□□ 1.34
CCDC60Q8IWA6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.44■■□□□ 1.34
CCDC60Q8IWA6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.44■■□□□ 1.34
CCDC60Q8IWA6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.44■■□□□ 1.34
CCDC60Q8IWA6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CCDC60Q8IWA6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CCDC60Q8IWA6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CCDC60Q8IWA6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.44■■□□□ 1.34
CCDC60Q8IWA6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CCDC60Q8IWA6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCDC60Q8IWA6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.43■■□□□ 1.34
CCDC60Q8IWA6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
CCDC60Q8IWA6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.43■■□□□ 1.34
CCDC60Q8IWA6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CCDC60Q8IWA6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
CCDC60Q8IWA6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.43■■□□□ 1.34
CCDC60Q8IWA6 AF201337.1-201ENST00000520239 748 ntBASIC23.43■■□□□ 1.34
CCDC60Q8IWA6 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.43■■□□□ 1.34
CCDC60Q8IWA6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC60Q8IWA6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC60Q8IWA6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.42■■□□□ 1.34
CCDC60Q8IWA6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC60Q8IWA6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC60Q8IWA6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
CCDC60Q8IWA6 AC105036.2-201ENST00000569468 176 ntBASIC23.42■■□□□ 1.34
CCDC60Q8IWA6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC60Q8IWA6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC60Q8IWA6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC60Q8IWA6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC60Q8IWA6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
CCDC60Q8IWA6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC60Q8IWA6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC60Q8IWA6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.41■■□□□ 1.34
CCDC60Q8IWA6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC60Q8IWA6 AC142086.2-201ENST00000569753 217 ntBASIC23.41■■□□□ 1.34
CCDC60Q8IWA6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC60Q8IWA6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC60Q8IWA6 EP400NL-214ENST00000641289 2402 ntBASIC23.41■■□□□ 1.34
CCDC60Q8IWA6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC60Q8IWA6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC60Q8IWA6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
CCDC60Q8IWA6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.4■■□□□ 1.34
CCDC60Q8IWA6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC60Q8IWA6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.4■■□□□ 1.34
CCDC60Q8IWA6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
CCDC60Q8IWA6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC60Q8IWA6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.4■■□□□ 1.34
CCDC60Q8IWA6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.4■■□□□ 1.34
CCDC60Q8IWA6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms