Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RTTNQ86VV8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTTNQ86VV8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.5■□□□□ 0.55
RTTNQ86VV8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTTNQ86VV8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTTNQ86VV8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTTNQ86VV8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
RTTNQ86VV8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTTNQ86VV8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTTNQ86VV8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTTNQ86VV8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTTNQ86VV8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTTNQ86VV8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTTNQ86VV8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTTNQ86VV8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTTNQ86VV8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.5■□□□□ 0.55
RTTNQ86VV8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.5■□□□□ 0.55
RTTNQ86VV8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.5■□□□□ 0.55
RTTNQ86VV8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTTNQ86VV8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTTNQ86VV8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTTNQ86VV8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTTNQ86VV8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
RTTNQ86VV8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTTNQ86VV8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.49■□□□□ 0.55
RTTNQ86VV8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.49■□□□□ 0.55
RTTNQ86VV8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTTNQ86VV8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.49■□□□□ 0.55
RTTNQ86VV8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTTNQ86VV8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTTNQ86VV8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTTNQ86VV8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.49■□□□□ 0.55
RTTNQ86VV8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTTNQ86VV8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.49■□□□□ 0.55
RTTNQ86VV8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTTNQ86VV8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
RTTNQ86VV8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTTNQ86VV8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTTNQ86VV8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTTNQ86VV8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTTNQ86VV8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RTTNQ86VV8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.49■□□□□ 0.55
RTTNQ86VV8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.49■□□□□ 0.55
RTTNQ86VV8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTTNQ86VV8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.49■□□□□ 0.55
RTTNQ86VV8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTTNQ86VV8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTTNQ86VV8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTTNQ86VV8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.48■□□□□ 0.55
RTTNQ86VV8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RTTNQ86VV8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTTNQ86VV8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTTNQ86VV8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.48■□□□□ 0.55
RTTNQ86VV8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTTNQ86VV8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RTTNQ86VV8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RTTNQ86VV8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.48■□□□□ 0.55
RTTNQ86VV8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.48■□□□□ 0.55
RTTNQ86VV8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.47■□□□□ 0.55
RTTNQ86VV8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.47■□□□□ 0.55
RTTNQ86VV8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTTNQ86VV8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RTTNQ86VV8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTTNQ86VV8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.47■□□□□ 0.55
RTTNQ86VV8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RTTNQ86VV8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
RTTNQ86VV8 AC026185.1-201ENST00000445748 174 ntBASIC18.47■□□□□ 0.55
RTTNQ86VV8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.47■□□□□ 0.55
RTTNQ86VV8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.47■□□□□ 0.55
RTTNQ86VV8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RTTNQ86VV8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RTTNQ86VV8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.47■□□□□ 0.55
RTTNQ86VV8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.47■□□□□ 0.55
RTTNQ86VV8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RTTNQ86VV8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.47■□□□□ 0.55
RTTNQ86VV8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTTNQ86VV8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.46■□□□□ 0.55
RTTNQ86VV8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTTNQ86VV8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.46■□□□□ 0.55
RTTNQ86VV8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.46■□□□□ 0.55
RTTNQ86VV8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.46■□□□□ 0.55
RTTNQ86VV8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.46■□□□□ 0.55
RTTNQ86VV8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.46■□□□□ 0.55
RTTNQ86VV8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTTNQ86VV8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.46■□□□□ 0.55
RTTNQ86VV8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTTNQ86VV8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTTNQ86VV8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTTNQ86VV8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RTTNQ86VV8 KRT18P61-201ENST00000585825 1298 ntBASIC18.46■□□□□ 0.55
RTTNQ86VV8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTTNQ86VV8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.46■□□□□ 0.55
RTTNQ86VV8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RTTNQ86VV8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTTNQ86VV8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.45■□□□□ 0.54
RTTNQ86VV8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTTNQ86VV8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTTNQ86VV8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTTNQ86VV8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RTTNQ86VV8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms