Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHFQ7M4L6 RNF165-205ENST00000588679 2904 ntBASIC18.94■□□□□ 0.62
SHFQ7M4L6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHFQ7M4L6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHFQ7M4L6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHFQ7M4L6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SHFQ7M4L6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SHFQ7M4L6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.93■□□□□ 0.62
SHFQ7M4L6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHFQ7M4L6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.93■□□□□ 0.62
SHFQ7M4L6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHFQ7M4L6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHFQ7M4L6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHFQ7M4L6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.93■□□□□ 0.62
SHFQ7M4L6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SHFQ7M4L6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
SHFQ7M4L6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SHFQ7M4L6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.93■□□□□ 0.62
SHFQ7M4L6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHFQ7M4L6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHFQ7M4L6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.93■□□□□ 0.62
SHFQ7M4L6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHFQ7M4L6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHFQ7M4L6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHFQ7M4L6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.92■□□□□ 0.62
SHFQ7M4L6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHFQ7M4L6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
SHFQ7M4L6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.92■□□□□ 0.62
SHFQ7M4L6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.92■□□□□ 0.62
SHFQ7M4L6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHFQ7M4L6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHFQ7M4L6 SERBP1P1-201ENST00000396021 1160 ntBASIC18.92■□□□□ 0.62
SHFQ7M4L6 AP005435.1-201ENST00000529293 1178 ntBASIC18.92■□□□□ 0.62
SHFQ7M4L6 AC011298.3-201ENST00000615796 283 ntBASIC18.92■□□□□ 0.62
SHFQ7M4L6 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.92■□□□□ 0.62
SHFQ7M4L6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.92■□□□□ 0.62
SHFQ7M4L6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHFQ7M4L6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SHFQ7M4L6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.91■□□□□ 0.62
SHFQ7M4L6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHFQ7M4L6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHFQ7M4L6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHFQ7M4L6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHFQ7M4L6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHFQ7M4L6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
SHFQ7M4L6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHFQ7M4L6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHFQ7M4L6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.91■□□□□ 0.62
SHFQ7M4L6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.91■□□□□ 0.62
SHFQ7M4L6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHFQ7M4L6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHFQ7M4L6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SHFQ7M4L6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHFQ7M4L6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SHFQ7M4L6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.91■□□□□ 0.62
SHFQ7M4L6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHFQ7M4L6 AC136469.2-201ENST00000623944 1028 ntBASIC18.91■□□□□ 0.62
SHFQ7M4L6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.91■□□□□ 0.62
SHFQ7M4L6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHFQ7M4L6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHFQ7M4L6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHFQ7M4L6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHFQ7M4L6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHFQ7M4L6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.91■□□□□ 0.62
SHFQ7M4L6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHFQ7M4L6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
SHFQ7M4L6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
SHFQ7M4L6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHFQ7M4L6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.91■□□□□ 0.62
SHFQ7M4L6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SHFQ7M4L6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHFQ7M4L6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHFQ7M4L6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHFQ7M4L6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SHFQ7M4L6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHFQ7M4L6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SHFQ7M4L6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHFQ7M4L6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHFQ7M4L6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
SHFQ7M4L6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SHFQ7M4L6 AP004607.7-201ENST00000527152 1677 ntBASIC18.9■□□□□ 0.62
SHFQ7M4L6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SHFQ7M4L6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHFQ7M4L6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
SHFQ7M4L6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SHFQ7M4L6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.9■□□□□ 0.62
SHFQ7M4L6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.9■□□□□ 0.62
SHFQ7M4L6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.9■□□□□ 0.62
SHFQ7M4L6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHFQ7M4L6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHFQ7M4L6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SHFQ7M4L6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHFQ7M4L6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHFQ7M4L6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SHFQ7M4L6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.89■□□□□ 0.62
SHFQ7M4L6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.89■□□□□ 0.62
SHFQ7M4L6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.89■□□□□ 0.61
SHFQ7M4L6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHFQ7M4L6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHFQ7M4L6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms