Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 ADPGK-206ENST00000563907 1041 ntTSL 317.4■□□□□ 0.388e-7■■■□□ 18.9
SND1Q7KZF4 ANO10-206ENST00000427171 746 ntTSL 517.29■□□□□ 0.366e-9■■■□□ 18.9
SND1Q7KZF4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.33e-6■■■□□ 18.9
SND1Q7KZF4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.35■□□□□ 0.216e-9■■■□□ 18.9
SND1Q7KZF4 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.14■□□□□ 0.176e-9■■■□□ 18.9
SND1Q7KZF4 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.95■□□□□ 0.146e-9■■■□□ 18.9
SND1Q7KZF4 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.6■□□□□ 0.096e-9■■■□□ 18.9
SND1Q7KZF4 ANO10-201ENST00000292246 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.636e-9■■■□□ 18.9
SND1Q7KZF4 HACD3-212ENST00000624437 2746 nt9.9□□□□□ -0.831e-14■■■□□ 18.9
SND1Q7KZF4 HACD3-204ENST00000562832 789 ntTSL 53.63□□□□□ -1.836e-9■■■□□ 18.9
SND1Q7KZF4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.438e-7■■■□□ 18.9
SND1Q7KZF4 KIAA0319L-203ENST00000426982 3213 ntTSL 513.4□□□□□ -0.268e-7■■■□□ 18.9
SND1Q7KZF4 APLP2-207ENST00000525604 1590 ntTSL 217.57■□□□□ 0.41e-14■■■□□ 18.9
SND1Q7KZF4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.863e-7■■■□□ 18.9
SND1Q7KZF4 SARAF-213ENST00000523761 566 ntTSL 419.09■□□□□ 0.652e-7■■■□□ 18.9
SND1Q7KZF4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.86■■□□□ 1.571e-6■■■□□ 18.9
SND1Q7KZF4 TBL1X-205ENST00000422314 496 ntTSL 224.68■■□□□ 1.541e-6■■■□□ 18.9
SND1Q7KZF4 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC13.64□□□□□ -0.231e-6■■■□□ 18.9
SND1Q7KZF4 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.231e-6■■■□□ 18.9
SND1Q7KZF4 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.261e-6■■■□□ 18.9
SND1Q7KZF4 TBL1X-208ENST00000452824 387 ntTSL 511.87□□□□□ -0.511e-6■■■□□ 18.9
SND1Q7KZF4 TBL1X-204ENST00000415293 565 ntTSL 57.14□□□□□ -1.271e-6■■■□□ 18.9
SND1Q7KZF4 TBL1X-207ENST00000441088 520 ntTSL 37.14□□□□□ -1.271e-6■■■□□ 18.9
SND1Q7KZF4 NPC1-204ENST00000586718 574 ntTSL 38.93□□□□□ -0.985e-8■■■□□ 18.9
SND1Q7KZF4 BSG-210ENST00000576925 611 ntTSL 217.62■□□□□ 0.413e-27■■■□□ 18.8
SND1Q7KZF4 ASGR2-206ENST00000576487 1055 ntTSL 1 (best)16.52■□□□□ 0.242e-18■■■□□ 18.8
SND1Q7KZF4 ASGR2-205ENST00000574868 1202 ntTSL 516.47■□□□□ 0.232e-18■■■□□ 18.8
SND1Q7KZF4 ASGR2-204ENST00000450034 932 ntTSL 214.78□□□□□ -0.042e-18■■■□□ 18.8
SND1Q7KZF4 PHGDH-225ENST00000641720 548 nt7.57□□□□□ -1.21e-9■■■□□ 18.8
SND1Q7KZF4 SURF4-203ENST00000371991 715 ntTSL 3 BASIC13.81□□□□□ -0.28e-12■■■□□ 18.8
SND1Q7KZF4 DDIT4-203ENST00000473155 753 ntTSL 1 (best)21.37■■□□□ 1.013e-17■■■□□ 18.8
SND1Q7KZF4 CYP51A1-203ENST00000435873 556 ntTSL 45.45□□□□□ -1.545e-13■■■□□ 18.8
SND1Q7KZF4 QSOX1-203ENST00000392029 1075 ntTSL 522.22■■□□□ 1.152e-7■■■□□ 18.8
SND1Q7KZF4 PLOD3-210ENST00000463479 505 ntTSL 213.28□□□□□ -0.283e-11■■■□□ 18.8
SND1Q7KZF4 CHID1-207ENST00000524832 878 ntTSL 211.12□□□□□ -0.635e-8■■■□□ 18.8
SND1Q7KZF4 PHGDH-226ENST00000641756 2132 nt19.25■□□□□ 0.671e-7■■■□□ 18.8
SND1Q7KZF4 PHGDH-230ENST00000641927 1678 nt18.21■□□□□ 0.511e-7■■■□□ 18.8
SND1Q7KZF4 PHGDH-227ENST00000641811 1031 nt17.9■□□□□ 0.461e-7■■■□□ 18.8
SND1Q7KZF4 PHGDH-201ENST00000369407 3180 ntTSL 213.81□□□□□ -0.21e-7■■■□□ 18.8
SND1Q7KZF4 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.061e-6■■■□□ 18.8
SND1Q7KZF4 FRRS1-203ENST00000489209 216 ntTSL 55.6□□□□□ -1.512e-6■■■□□ 18.8
SND1Q7KZF4 SERPING1-208ENST00000528996 956 ntTSL 317.19■□□□□ 0.346e-8■■■□□ 18.8
SND1Q7KZF4 AQP3-203ENST00000473153 751 ntTSL 59.73□□□□□ -0.853e-6■■■□□ 18.8
SND1Q7KZF4 SERPINA6-203ENST00000557225 719 ntTSL 28.77□□□□□ -1.011e-8■■■□□ 18.8
SND1Q7KZF4 HM13-207ENST00000464173 587 ntTSL 213.28□□□□□ -0.281e-8■■■□□ 18.8
SND1Q7KZF4 SLC3A2-211ENST00000538084 741 ntTSL 315.32■□□□□ 0.048e-12■■■□□ 18.8
SND1Q7KZF4 PLXNB2-202ENST00000411680 704 ntTSL 217.43■□□□□ 0.384e-9■■■□□ 18.8
SND1Q7KZF4 HMGCR-201ENST00000287936 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.635e-7■■■□□ 18.7
SND1Q7KZF4 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC8.63□□□□□ -1.035e-7■■■□□ 18.7
SND1Q7KZF4 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.145e-7■■■□□ 18.7
SND1Q7KZF4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.319e-18■■■□□ 18.7
SND1Q7KZF4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.739e-18■■■□□ 18.7
SND1Q7KZF4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.213e-7■■■□□ 18.7
SND1Q7KZF4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.143e-7■■■□□ 18.7
SND1Q7KZF4 EIF6-204ENST00000415116 739 ntTSL 521.61■■□□□ 1.053e-7■■■□□ 18.7
SND1Q7KZF4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.65■□□□□ 0.423e-7■■■□□ 18.7
SND1Q7KZF4 EIF6-205ENST00000440766 798 ntTSL 216.81■□□□□ 0.283e-7■■■□□ 18.7
SND1Q7KZF4 EIF6-206ENST00000447927 932 ntTSL 1 (best)16.81■□□□□ 0.283e-7■■■□□ 18.7
SND1Q7KZF4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.263e-7■■■□□ 18.7
SND1Q7KZF4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.183e-7■■■□□ 18.7
SND1Q7KZF4 F10-204ENST00000410083 1211 ntTSL 1 (best)14.83□□□□□ -0.042e-8■■■□□ 18.7
SND1Q7KZF4 YARS-202ENST00000466052 728 ntTSL 310.95□□□□□ -0.662e-6■■■□□ 18.7
SND1Q7KZF4 HERPUD1-216ENST00000568814 509 ntTSL 210.66□□□□□ -0.74e-8■■■□□ 18.7
SND1Q7KZF4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.491e-26■■■□□ 18.7
SND1Q7KZF4 GAPDH-206ENST00000466525 1720 ntTSL 516.66■□□□□ 0.261e-26■■■□□ 18.7
SND1Q7KZF4 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.65□□□□□ -0.061e-26■■■□□ 18.7
SND1Q7KZF4 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.131e-26■■■□□ 18.7
SND1Q7KZF4 GAPDH-208ENST00000474249 1333 ntTSL 513.71□□□□□ -0.211e-26■■■□□ 18.7
SND1Q7KZF4 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.271e-26■■■□□ 18.7
SND1Q7KZF4 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC12.45□□□□□ -0.421e-26■■■□□ 18.7
SND1Q7KZF4 GAPDH-207ENST00000466588 1363 ntTSL 511.47□□□□□ -0.571e-26■■■□□ 18.7
SND1Q7KZF4 GAPDH-211ENST00000619601 1086 ntTSL 5 BASIC11.36□□□□□ -0.591e-26■■■□□ 18.7
SND1Q7KZF4 C3-208ENST00000596548 576 ntTSL 35.54□□□□□ -1.523e-50■■■□□ 18.7
SND1Q7KZF4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.041e-6■■■□□ 18.7
SND1Q7KZF4 UROD-219ENST00000494399 1848 ntTSL 214.73□□□□□ -0.051e-6■■■□□ 18.7
SND1Q7KZF4 UROD-221ENST00000636293 1102 ntTSL 5 BASIC11.92□□□□□ -0.51e-6■■■□□ 18.7
SND1Q7KZF4 UROD-222ENST00000636836 1173 ntTSL 5 BASIC11.82□□□□□ -0.521e-6■■■□□ 18.7
SND1Q7KZF4 MAN1B1-209ENST00000536349 5048 ntTSL 216.5■□□□□ 0.234e-7■■■□□ 18.7
SND1Q7KZF4 MAN1B1-205ENST00000480100 3483 ntTSL 214.51□□□□□ -0.094e-7■■■□□ 18.7
SND1Q7KZF4 MAN1B1-206ENST00000535028 3886 ntTSL 212.52□□□□□ -0.44e-7■■■□□ 18.7
SND1Q7KZF4 MAN1B1-211ENST00000540391 3940 ntTSL 211.8□□□□□ -0.524e-7■■■□□ 18.7
SND1Q7KZF4 NCLN-204ENST00000588428 1080 ntTSL 521.66■■□□□ 1.061e-7■■■□□ 18.7
SND1Q7KZF4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.24■□□□□ 0.991e-7■■■□□ 18.7
SND1Q7KZF4 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.041e-7■■■□□ 18.7
SND1Q7KZF4 SLC38A5-206ENST00000480105 894 ntTSL 213.46□□□□□ -0.251e-10■■■□□ 18.7
SND1Q7KZF4 ASPHD1-205ENST00000566693 1732 ntTSL 1 (best)25.52■■□□□ 1.684e-9■■■□□ 18.7
SND1Q7KZF4 ASPHD1-202ENST00000414952 1451 ntTSL 224.85■■□□□ 1.574e-9■■■□□ 18.7
SND1Q7KZF4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.924e-9■■■□□ 18.7
SND1Q7KZF4 ASPHD1-204ENST00000563177 775 ntAPPRIS ALT2 TSL 520.44■□□□□ 0.864e-9■■■□□ 18.7
SND1Q7KZF4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.774e-9■■■□□ 18.7
SND1Q7KZF4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.029e-7■■■□□ 18.7
SND1Q7KZF4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.479e-7■■■□□ 18.7
SND1Q7KZF4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.82■■□□□ 1.082e-9■■■□□ 18.7
SND1Q7KZF4 QPCTL-203ENST00000591606 561 ntTSL 321.86■■□□□ 1.095e-6■■■□□ 18.7
SND1Q7KZF4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.86■□□□□ 0.775e-6■■■□□ 18.7
SND1Q7KZF4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.665e-6■■■□□ 18.7
SND1Q7KZF4 KRT18-204ENST00000548015 928 ntTSL 211.29□□□□□ -0.66e-13■■■□□ 18.7
SND1Q7KZF4 SLC3A2-218ENST00000541649 515 ntTSL 37.36□□□□□ -1.231e-21■■■□□ 18.7
SND1Q7KZF4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.89e-8■■■□□ 18.7
SND1Q7KZF4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.49e-8■■■□□ 18.7
Retrieved 100 of 13,567 protein–RNA pairs in 79.9 ms