Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDHR3Q6ZTQ4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDHR3Q6ZTQ4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
CDHR3Q6ZTQ4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
CDHR3Q6ZTQ4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.08■□□□□ 0.97
CDHR3Q6ZTQ4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDHR3Q6ZTQ4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDHR3Q6ZTQ4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDHR3Q6ZTQ4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDHR3Q6ZTQ4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDHR3Q6ZTQ4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.08■□□□□ 0.97
CDHR3Q6ZTQ4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDHR3Q6ZTQ4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDHR3Q6ZTQ4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDHR3Q6ZTQ4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDHR3Q6ZTQ4 AP005435.1-201ENST00000529293 1178 ntBASIC21.08■□□□□ 0.97
CDHR3Q6ZTQ4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDHR3Q6ZTQ4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.08■□□□□ 0.97
CDHR3Q6ZTQ4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDHR3Q6ZTQ4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CDHR3Q6ZTQ4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDHR3Q6ZTQ4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CDHR3Q6ZTQ4 AC092667.1-201ENST00000434301 2586 ntBASIC21.08■□□□□ 0.96
CDHR3Q6ZTQ4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDHR3Q6ZTQ4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDHR3Q6ZTQ4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.07■□□□□ 0.96
CDHR3Q6ZTQ4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.07■□□□□ 0.96
CDHR3Q6ZTQ4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CDHR3Q6ZTQ4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.07■□□□□ 0.96
CDHR3Q6ZTQ4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.07■□□□□ 0.96
CDHR3Q6ZTQ4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDHR3Q6ZTQ4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CDHR3Q6ZTQ4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDHR3Q6ZTQ4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDHR3Q6ZTQ4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.07■□□□□ 0.96
CDHR3Q6ZTQ4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.06■□□□□ 0.96
CDHR3Q6ZTQ4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CDHR3Q6ZTQ4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.06■□□□□ 0.96
CDHR3Q6ZTQ4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDHR3Q6ZTQ4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDHR3Q6ZTQ4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDHR3Q6ZTQ4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.06■□□□□ 0.96
CDHR3Q6ZTQ4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDHR3Q6ZTQ4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.06■□□□□ 0.96
CDHR3Q6ZTQ4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDHR3Q6ZTQ4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDHR3Q6ZTQ4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDHR3Q6ZTQ4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.06■□□□□ 0.96
CDHR3Q6ZTQ4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.06■□□□□ 0.96
CDHR3Q6ZTQ4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDHR3Q6ZTQ4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CDHR3Q6ZTQ4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.05■□□□□ 0.96
CDHR3Q6ZTQ4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDHR3Q6ZTQ4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.05■□□□□ 0.96
CDHR3Q6ZTQ4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDHR3Q6ZTQ4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.05■□□□□ 0.96
CDHR3Q6ZTQ4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
CDHR3Q6ZTQ4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.05■□□□□ 0.96
CDHR3Q6ZTQ4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.05■□□□□ 0.96
CDHR3Q6ZTQ4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CDHR3Q6ZTQ4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.05■□□□□ 0.96
CDHR3Q6ZTQ4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CDHR3Q6ZTQ4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDHR3Q6ZTQ4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDHR3Q6ZTQ4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDHR3Q6ZTQ4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDHR3Q6ZTQ4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDHR3Q6ZTQ4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CDHR3Q6ZTQ4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDHR3Q6ZTQ4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDHR3Q6ZTQ4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDHR3Q6ZTQ4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDHR3Q6ZTQ4 MIR572-201ENST00000384983 95 ntBASIC21.04■□□□□ 0.96
CDHR3Q6ZTQ4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.04■□□□□ 0.96
CDHR3Q6ZTQ4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.04■□□□□ 0.96
CDHR3Q6ZTQ4 AC087239.1-201ENST00000622671 572 ntBASIC21.04■□□□□ 0.96
CDHR3Q6ZTQ4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDHR3Q6ZTQ4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.04■□□□□ 0.96
CDHR3Q6ZTQ4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CDHR3Q6ZTQ4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDHR3Q6ZTQ4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDHR3Q6ZTQ4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDHR3Q6ZTQ4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDHR3Q6ZTQ4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDHR3Q6ZTQ4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.03■□□□□ 0.96
CDHR3Q6ZTQ4 AP004607.7-201ENST00000527152 1677 ntBASIC21.03■□□□□ 0.96
CDHR3Q6ZTQ4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDHR3Q6ZTQ4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDHR3Q6ZTQ4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDHR3Q6ZTQ4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDHR3Q6ZTQ4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.03■□□□□ 0.96
CDHR3Q6ZTQ4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.03■□□□□ 0.96
CDHR3Q6ZTQ4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDHR3Q6ZTQ4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.03■□□□□ 0.96
CDHR3Q6ZTQ4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.03■□□□□ 0.96
CDHR3Q6ZTQ4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDHR3Q6ZTQ4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDHR3Q6ZTQ4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDHR3Q6ZTQ4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDHR3Q6ZTQ4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms