Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC31.69■■■□□ 2.66
CCDC141Q6ZP82 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CCDC141Q6ZP82 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
CCDC141Q6ZP82 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC31.69■■■□□ 2.66
CCDC141Q6ZP82 AC245052.3-201ENST00000450182 901 ntBASIC31.69■■■□□ 2.66
CCDC141Q6ZP82 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC31.69■■■□□ 2.66
CCDC141Q6ZP82 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CCDC141Q6ZP82 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CCDC141Q6ZP82 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC31.69■■■□□ 2.66
CCDC141Q6ZP82 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CCDC141Q6ZP82 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
CCDC141Q6ZP82 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CCDC141Q6ZP82 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CCDC141Q6ZP82 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
CCDC141Q6ZP82 PKM-204ENST00000449901 2526 ntTSL 2 BASIC31.68■■■□□ 2.66
CCDC141Q6ZP82 AC092053.2-201ENST00000640557 1818 ntBASIC31.67■■■□□ 2.66
CCDC141Q6ZP82 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
CCDC141Q6ZP82 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC31.67■■■□□ 2.66
CCDC141Q6ZP82 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC31.67■■■□□ 2.66
CCDC141Q6ZP82 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC31.67■■■□□ 2.66
CCDC141Q6ZP82 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC31.67■■■□□ 2.66
CCDC141Q6ZP82 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CCDC141Q6ZP82 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
CCDC141Q6ZP82 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CCDC141Q6ZP82 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CCDC141Q6ZP82 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC31.66■■■□□ 2.66
CCDC141Q6ZP82 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC31.66■■■□□ 2.66
CCDC141Q6ZP82 LSM12P1-201ENST00000411836 588 ntBASIC31.66■■■□□ 2.66
CCDC141Q6ZP82 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CCDC141Q6ZP82 AC060766.5-201ENST00000590539 871 ntBASIC31.66■■■□□ 2.66
CCDC141Q6ZP82 AC073648.6-201ENST00000641589 218 ntBASIC31.66■■■□□ 2.66
CCDC141Q6ZP82 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CCDC141Q6ZP82 AC026471.6-201ENST00000622954 1905 ntBASIC31.66■■■□□ 2.66
CCDC141Q6ZP82 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CCDC141Q6ZP82 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CCDC141Q6ZP82 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC31.65■■■□□ 2.66
CCDC141Q6ZP82 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC31.65■■■□□ 2.66
CCDC141Q6ZP82 AC008403.3-201ENST00000598924 454 ntBASIC31.65■■■□□ 2.66
CCDC141Q6ZP82 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CCDC141Q6ZP82 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CCDC141Q6ZP82 AC127496.7-201ENST00000625110 1798 ntBASIC31.65■■■□□ 2.66
CCDC141Q6ZP82 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CCDC141Q6ZP82 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
CCDC141Q6ZP82 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CCDC141Q6ZP82 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CCDC141Q6ZP82 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CCDC141Q6ZP82 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC31.64■■■□□ 2.66
CCDC141Q6ZP82 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CCDC141Q6ZP82 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC31.64■■■□□ 2.66
CCDC141Q6ZP82 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CCDC141Q6ZP82 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC31.64■■■□□ 2.66
CCDC141Q6ZP82 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC31.64■■■□□ 2.66
CCDC141Q6ZP82 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
CCDC141Q6ZP82 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CCDC141Q6ZP82 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CCDC141Q6ZP82 GATS-209ENST00000454084 1030 ntTSL 3 BASIC31.64■■■□□ 2.66
CCDC141Q6ZP82 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
CCDC141Q6ZP82 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC31.64■■■□□ 2.66
CCDC141Q6ZP82 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CCDC141Q6ZP82 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CCDC141Q6ZP82 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CCDC141Q6ZP82 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
CCDC141Q6ZP82 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CCDC141Q6ZP82 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CCDC141Q6ZP82 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
CCDC141Q6ZP82 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CCDC141Q6ZP82 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC31.63■■■□□ 2.65
CCDC141Q6ZP82 NME6-213ENST00000451657 871 ntTSL 2 BASIC31.63■■■□□ 2.65
CCDC141Q6ZP82 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC31.63■■■□□ 2.65
CCDC141Q6ZP82 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CCDC141Q6ZP82 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CCDC141Q6ZP82 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CCDC141Q6ZP82 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CCDC141Q6ZP82 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CCDC141Q6ZP82 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CCDC141Q6ZP82 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC31.62■■■□□ 2.65
CCDC141Q6ZP82 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC31.62■■■□□ 2.65
CCDC141Q6ZP82 C11orf96-202ENST00000528572 1834 ntBASIC31.61■■■□□ 2.65
CCDC141Q6ZP82 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC141Q6ZP82 AL158047.1-201ENST00000445918 881 ntBASIC31.61■■■□□ 2.65
CCDC141Q6ZP82 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC141Q6ZP82 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC31.61■■■□□ 2.65
CCDC141Q6ZP82 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC31.61■■■□□ 2.65
CCDC141Q6ZP82 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC141Q6ZP82 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC31.6■■■□□ 2.65
CCDC141Q6ZP82 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC31.6■■■□□ 2.65
CCDC141Q6ZP82 AC142381.4-202ENST00000563973 229 ntBASIC31.6■■■□□ 2.65
CCDC141Q6ZP82 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC31.6■■■□□ 2.65
CCDC141Q6ZP82 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC31.6■■■□□ 2.65
CCDC141Q6ZP82 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC31.6■■■□□ 2.65
CCDC141Q6ZP82 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CCDC141Q6ZP82 AC080038.3-201ENST00000623346 1952 ntBASIC31.6■■■□□ 2.65
CCDC141Q6ZP82 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC141Q6ZP82 CDV3P1-201ENST00000471403 739 ntBASIC31.59■■■□□ 2.65
CCDC141Q6ZP82 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC31.59■■■□□ 2.65
CCDC141Q6ZP82 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC141Q6ZP82 HLA-B-256ENST00000639848 1089 ntBASIC31.59■■■□□ 2.65
CCDC141Q6ZP82 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC31.59■■■□□ 2.65
CCDC141Q6ZP82 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC141Q6ZP82 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms