Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF111Q6ZNA4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF111Q6ZNA4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF111Q6ZNA4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF111Q6ZNA4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF111Q6ZNA4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF111Q6ZNA4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF111Q6ZNA4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF111Q6ZNA4 AP005435.1-201ENST00000529293 1178 ntBASIC20.37■□□□□ 0.85
RNF111Q6ZNA4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF111Q6ZNA4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
RNF111Q6ZNA4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF111Q6ZNA4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
RNF111Q6ZNA4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF111Q6ZNA4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF111Q6ZNA4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF111Q6ZNA4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF111Q6ZNA4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RNF111Q6ZNA4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF111Q6ZNA4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF111Q6ZNA4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF111Q6ZNA4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RNF111Q6ZNA4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF111Q6ZNA4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF111Q6ZNA4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF111Q6ZNA4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RNF111Q6ZNA4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF111Q6ZNA4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF111Q6ZNA4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF111Q6ZNA4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
RNF111Q6ZNA4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RNF111Q6ZNA4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RNF111Q6ZNA4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RNF111Q6ZNA4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF111Q6ZNA4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF111Q6ZNA4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RNF111Q6ZNA4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF111Q6ZNA4 AFG3L1P-217ENST00000557444 2447 ntBASIC20.35■□□□□ 0.85
RNF111Q6ZNA4 AC026471.6-201ENST00000622954 1905 ntBASIC20.35■□□□□ 0.85
RNF111Q6ZNA4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF111Q6ZNA4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF111Q6ZNA4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF111Q6ZNA4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF111Q6ZNA4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF111Q6ZNA4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
RNF111Q6ZNA4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF111Q6ZNA4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF111Q6ZNA4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RNF111Q6ZNA4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF111Q6ZNA4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF111Q6ZNA4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF111Q6ZNA4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF111Q6ZNA4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF111Q6ZNA4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF111Q6ZNA4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
RNF111Q6ZNA4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
RNF111Q6ZNA4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RNF111Q6ZNA4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF111Q6ZNA4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF111Q6ZNA4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF111Q6ZNA4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF111Q6ZNA4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF111Q6ZNA4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF111Q6ZNA4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF111Q6ZNA4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF111Q6ZNA4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF111Q6ZNA4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF111Q6ZNA4 IGHV3-19-201ENST00000521488 291 ntBASIC20.33■□□□□ 0.85
RNF111Q6ZNA4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.33■□□□□ 0.85
RNF111Q6ZNA4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
RNF111Q6ZNA4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RNF111Q6ZNA4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF111Q6ZNA4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF111Q6ZNA4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RNF111Q6ZNA4 TSPY26P-201ENST00000476365 1326 ntBASIC20.31■□□□□ 0.84
RNF111Q6ZNA4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF111Q6ZNA4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF111Q6ZNA4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms