Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIF1Q5UIP0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.71■□□□□ 0.91
RIF1Q5UIP0 AP004607.7-201ENST00000527152 1677 ntBASIC20.7■□□□□ 0.91
RIF1Q5UIP0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIF1Q5UIP0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RIF1Q5UIP0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RIF1Q5UIP0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.7■□□□□ 0.9
RIF1Q5UIP0 MIR6786-201ENST00000616843 113 ntBASIC20.7■□□□□ 0.9
RIF1Q5UIP0 AC100791.3-201ENST00000617619 330 ntBASIC20.7■□□□□ 0.9
RIF1Q5UIP0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RIF1Q5UIP0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RIF1Q5UIP0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIF1Q5UIP0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
RIF1Q5UIP0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIF1Q5UIP0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RIF1Q5UIP0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RIF1Q5UIP0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.7■□□□□ 0.9
RIF1Q5UIP0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.7■□□□□ 0.9
RIF1Q5UIP0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIF1Q5UIP0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RIF1Q5UIP0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.7■□□□□ 0.9
RIF1Q5UIP0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIF1Q5UIP0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIF1Q5UIP0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIF1Q5UIP0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.69■□□□□ 0.9
RIF1Q5UIP0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.69■□□□□ 0.9
RIF1Q5UIP0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.69■□□□□ 0.9
RIF1Q5UIP0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.69■□□□□ 0.9
RIF1Q5UIP0 AC243732.1-201ENST00000612648 864 ntBASIC20.69■□□□□ 0.9
RIF1Q5UIP0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIF1Q5UIP0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIF1Q5UIP0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RIF1Q5UIP0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RIF1Q5UIP0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIF1Q5UIP0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RIF1Q5UIP0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIF1Q5UIP0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
RIF1Q5UIP0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
RIF1Q5UIP0 AC113410.3-201ENST00000623366 203 ntBASIC20.69■□□□□ 0.9
RIF1Q5UIP0 AL023875.1-201ENST00000640777 796 ntBASIC20.69■□□□□ 0.9
RIF1Q5UIP0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIF1Q5UIP0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RIF1Q5UIP0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.68■□□□□ 0.9
RIF1Q5UIP0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.68■□□□□ 0.9
RIF1Q5UIP0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.68■□□□□ 0.9
RIF1Q5UIP0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.68■□□□□ 0.9
RIF1Q5UIP0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.68■□□□□ 0.9
RIF1Q5UIP0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.68■□□□□ 0.9
RIF1Q5UIP0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIF1Q5UIP0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIF1Q5UIP0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.68■□□□□ 0.9
RIF1Q5UIP0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.68■□□□□ 0.9
RIF1Q5UIP0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIF1Q5UIP0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.68■□□□□ 0.9
RIF1Q5UIP0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RIF1Q5UIP0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.68■□□□□ 0.9
RIF1Q5UIP0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.68■□□□□ 0.9
RIF1Q5UIP0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.68■□□□□ 0.9
RIF1Q5UIP0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.68■□□□□ 0.9
RIF1Q5UIP0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RIF1Q5UIP0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.67■□□□□ 0.9
RIF1Q5UIP0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.67■□□□□ 0.9
RIF1Q5UIP0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RIF1Q5UIP0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RIF1Q5UIP0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RIF1Q5UIP0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RIF1Q5UIP0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.67■□□□□ 0.9
RIF1Q5UIP0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RIF1Q5UIP0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.67■□□□□ 0.9
RIF1Q5UIP0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
RIF1Q5UIP0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.67■□□□□ 0.9
RIF1Q5UIP0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIF1Q5UIP0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.67■□□□□ 0.9
RIF1Q5UIP0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.66■□□□□ 0.9
RIF1Q5UIP0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIF1Q5UIP0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIF1Q5UIP0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIF1Q5UIP0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIF1Q5UIP0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIF1Q5UIP0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.66■□□□□ 0.9
RIF1Q5UIP0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RIF1Q5UIP0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RIF1Q5UIP0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RIF1Q5UIP0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.66■□□□□ 0.9
RIF1Q5UIP0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.66■□□□□ 0.9
RIF1Q5UIP0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.66■□□□□ 0.9
RIF1Q5UIP0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIF1Q5UIP0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RIF1Q5UIP0 KRT8P9-201ENST00000558927 1449 ntBASIC20.65■□□□□ 0.9
RIF1Q5UIP0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIF1Q5UIP0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIF1Q5UIP0 AC005521.1-201ENST00000393351 872 ntBASIC20.65■□□□□ 0.9
RIF1Q5UIP0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.65■□□□□ 0.9
RIF1Q5UIP0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RIF1Q5UIP0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RIF1Q5UIP0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIF1Q5UIP0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.65■□□□□ 0.9
RIF1Q5UIP0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RIF1Q5UIP0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.65■□□□□ 0.9
RIF1Q5UIP0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms