Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AC087499.1-201ENST00000418141 1075 ntBASIC34.88■■■■□ 3.17
SNAPC4Q5SXM2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC34.88■■■■□ 3.17
SNAPC4Q5SXM2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
SNAPC4Q5SXM2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
SNAPC4Q5SXM2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC34.88■■■■□ 3.17
SNAPC4Q5SXM2 LINC01124-201ENST00000409786 2117 ntBASIC34.87■■■■□ 3.17
SNAPC4Q5SXM2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC34.87■■■■□ 3.17
SNAPC4Q5SXM2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
SNAPC4Q5SXM2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
SNAPC4Q5SXM2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC34.87■■■■□ 3.17
SNAPC4Q5SXM2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
SNAPC4Q5SXM2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
SNAPC4Q5SXM2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
SNAPC4Q5SXM2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC34.87■■■■□ 3.17
SNAPC4Q5SXM2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC34.87■■■■□ 3.17
SNAPC4Q5SXM2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC34.87■■■■□ 3.17
SNAPC4Q5SXM2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC34.87■■■■□ 3.17
SNAPC4Q5SXM2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC34.86■■■■□ 3.17
SNAPC4Q5SXM2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
SNAPC4Q5SXM2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC34.86■■■■□ 3.17
SNAPC4Q5SXM2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC34.86■■■■□ 3.17
SNAPC4Q5SXM2 AC100791.3-201ENST00000617619 330 ntBASIC34.86■■■■□ 3.17
SNAPC4Q5SXM2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC34.86■■■■□ 3.17
SNAPC4Q5SXM2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
SNAPC4Q5SXM2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC34.85■■■■□ 3.17
SNAPC4Q5SXM2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC34.85■■■■□ 3.17
SNAPC4Q5SXM2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC34.85■■■■□ 3.17
SNAPC4Q5SXM2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC34.85■■■■□ 3.17
SNAPC4Q5SXM2 TK2-213ENST00000563369 882 ntTSL 5 BASIC34.85■■■■□ 3.17
SNAPC4Q5SXM2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC34.85■■■■□ 3.17
SNAPC4Q5SXM2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC34.85■■■■□ 3.17
SNAPC4Q5SXM2 AL445228.2-201ENST00000605589 952 ntBASIC34.85■■■■□ 3.17
SNAPC4Q5SXM2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
SNAPC4Q5SXM2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
SNAPC4Q5SXM2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC34.85■■■■□ 3.17
SNAPC4Q5SXM2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC34.85■■■■□ 3.17
SNAPC4Q5SXM2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
SNAPC4Q5SXM2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
SNAPC4Q5SXM2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
SNAPC4Q5SXM2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
SNAPC4Q5SXM2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC34.84■■■■□ 3.17
SNAPC4Q5SXM2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
SNAPC4Q5SXM2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
SNAPC4Q5SXM2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
SNAPC4Q5SXM2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
SNAPC4Q5SXM2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
SNAPC4Q5SXM2 RPS2P55-201ENST00000397318 883 ntBASIC34.84■■■■□ 3.17
SNAPC4Q5SXM2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC34.84■■■■□ 3.17
SNAPC4Q5SXM2 AC107956.1-201ENST00000494359 873 ntBASIC34.84■■■■□ 3.17
SNAPC4Q5SXM2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC34.83■■■■□ 3.17
SNAPC4Q5SXM2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC34.83■■■■□ 3.17
SNAPC4Q5SXM2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
SNAPC4Q5SXM2 AC091799.1-201ENST00000422823 811 ntBASIC34.83■■■■□ 3.17
SNAPC4Q5SXM2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
SNAPC4Q5SXM2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC34.83■■■■□ 3.17
SNAPC4Q5SXM2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC34.83■■■■□ 3.17
SNAPC4Q5SXM2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC34.83■■■■□ 3.17
SNAPC4Q5SXM2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
SNAPC4Q5SXM2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
SNAPC4Q5SXM2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC34.82■■■■□ 3.16
SNAPC4Q5SXM2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
SNAPC4Q5SXM2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC34.82■■■■□ 3.16
SNAPC4Q5SXM2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC34.82■■■■□ 3.16
SNAPC4Q5SXM2 AC133561.5-201ENST00000635547 218 ntBASIC34.82■■■■□ 3.16
SNAPC4Q5SXM2 AC097493.4-201ENST00000641197 219 ntBASIC34.82■■■■□ 3.16
SNAPC4Q5SXM2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
SNAPC4Q5SXM2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC34.81■■■■□ 3.16
SNAPC4Q5SXM2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC34.81■■■■□ 3.16
SNAPC4Q5SXM2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
SNAPC4Q5SXM2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC34.81■■■■□ 3.16
SNAPC4Q5SXM2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC34.81■■■■□ 3.16
SNAPC4Q5SXM2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC34.81■■■■□ 3.16
SNAPC4Q5SXM2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC34.81■■■■□ 3.16
SNAPC4Q5SXM2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
SNAPC4Q5SXM2 TSPY15P-201ENST00000457163 923 ntBASIC34.8■■■■□ 3.16
SNAPC4Q5SXM2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC34.8■■■■□ 3.16
SNAPC4Q5SXM2 OR2A1-AS1-207ENST00000486094 819 ntBASIC34.8■■■■□ 3.16
SNAPC4Q5SXM2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC34.8■■■■□ 3.16
SNAPC4Q5SXM2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
SNAPC4Q5SXM2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC34.79■■■■□ 3.16
SNAPC4Q5SXM2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC34.79■■■■□ 3.16
SNAPC4Q5SXM2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
SNAPC4Q5SXM2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
SNAPC4Q5SXM2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
SNAPC4Q5SXM2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
SNAPC4Q5SXM2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC34.78■■■■□ 3.16
SNAPC4Q5SXM2 POM121L13P-201ENST00000422362 380 ntBASIC34.78■■■■□ 3.16
SNAPC4Q5SXM2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC34.78■■■■□ 3.16
SNAPC4Q5SXM2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
SNAPC4Q5SXM2 AL589743.5-201ENST00000616611 1050 ntBASIC34.78■■■■□ 3.16
SNAPC4Q5SXM2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC34.78■■■■□ 3.16
SNAPC4Q5SXM2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC34.78■■■■□ 3.16
SNAPC4Q5SXM2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
SNAPC4Q5SXM2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
SNAPC4Q5SXM2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
SNAPC4Q5SXM2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
SNAPC4Q5SXM2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC34.77■■■■□ 3.16
SNAPC4Q5SXM2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
SNAPC4Q5SXM2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC34.77■■■■□ 3.16
SNAPC4Q5SXM2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms